Gene : Lsat_1_v5_gn_5_10420 L. sativa V8
Defline:  (1 of 9) PTHR32387//PTHR32387:SF3 - FAMILY NOT NAMED // ATP/DNA BINDING PROTEIN Genomic Order:  308
Name:  ? Lsat_1_v5_gn_5_10420 Secondary Identifier:  ? PAC:38969303
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_10420 0.5kb upstream 0.5kb upstream 3572   true Lsat_1_v8_lg_5: 20625499-20629070 Lactuca sativa
Lsat_1_v5_gn_5_10420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 20628571-20629070 Lactuca sativa
Lsat_1_v5_gn_5_10420 0.5kb downstream 0.5kb downstream 3572   true Lsat_1_v8_lg_5: 20624999-20628570 Lactuca sativa
Lsat_1_v5_gn_5_10420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 20624999-20625498 Lactuca sativa
Lsat_1_v5_gn_5_10420 1.0kb upstream 1.0kb upstream 4072   true Lsat_1_v8_lg_5: 20625499-20629570 Lactuca sativa
Lsat_1_v5_gn_5_10420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 20628571-20629570 Lactuca sativa
Lsat_1_v5_gn_5_10420 1.0kb downstream 1.0kb downstream 4072   true Lsat_1_v8_lg_5: 20624499-20628570 Lactuca sativa
Lsat_1_v5_gn_5_10420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 20624499-20625498 Lactuca sativa
Lsat_1_v5_gn_5_10420 2.0kb upstream 2.0kb upstream 5072   true Lsat_1_v8_lg_5: 20625499-20630570 Lactuca sativa
Lsat_1_v5_gn_5_10420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 20628571-20630570 Lactuca sativa
Lsat_1_v5_gn_5_10420 2.0kb downstream 2.0kb downstream 5072   true Lsat_1_v8_lg_5: 20623499-20628570 Lactuca sativa
Lsat_1_v5_gn_5_10420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 20623499-20625498 Lactuca sativa
Lsat_1_v5_gn_5_10420 5.0kb upstream 5.0kb upstream 8072   true Lsat_1_v8_lg_5: 20625499-20633570 Lactuca sativa
Lsat_1_v5_gn_5_10420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 20628571-20633570 Lactuca sativa
Lsat_1_v5_gn_5_10420 5.0kb downstream 5.0kb downstream 8072   true Lsat_1_v8_lg_5: 20620499-20628570 Lactuca sativa
Lsat_1_v5_gn_5_10420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 20620499-20625498 Lactuca sativa
Lsat_1_v5_gn_5_10420 10.0kb upstream 10.0kb upstream 13072   true Lsat_1_v8_lg_5: 20625499-20638570 Lactuca sativa
Lsat_1_v5_gn_5_10420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 20628571-20638570 Lactuca sativa
Lsat_1_v5_gn_5_10420 10.0kb downstream 10.0kb downstream 13072   true Lsat_1_v8_lg_5: 20615499-20628570 Lactuca sativa
Lsat_1_v5_gn_5_10420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 20615499-20625498 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121445776 5263 Asterids Singleton cluster - no MSA
123750476 5271 Pentapetalae View MSA
122773673 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain