Gene : Lsat_1_v5_gn_5_105541 L. sativa V8
Defline:  (1 of 1) PTHR15606//PTHR15606:SF3 - DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED // GPALPP MOTIFS-CONTAINING PROTEIN 1 Genomic Order:  2765
Name:  ? Lsat_1_v5_gn_5_105541 Secondary Identifier:  ? PAC:38963727
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_105541 0.5kb upstream 0.5kb upstream 4378   true Lsat_1_v8_lg_5: 223867719-223872096 Lactuca sativa
Lsat_1_v5_gn_5_105541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 223867719-223868218 Lactuca sativa
Lsat_1_v5_gn_5_105541 0.5kb downstream 0.5kb downstream 4378   true Lsat_1_v8_lg_5: 223868219-223872596 Lactuca sativa
Lsat_1_v5_gn_5_105541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 223872097-223872596 Lactuca sativa
Lsat_1_v5_gn_5_105541 1.0kb upstream 1.0kb upstream 4878   true Lsat_1_v8_lg_5: 223867219-223872096 Lactuca sativa
Lsat_1_v5_gn_5_105541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 223867219-223868218 Lactuca sativa
Lsat_1_v5_gn_5_105541 1.0kb downstream 1.0kb downstream 4878   true Lsat_1_v8_lg_5: 223868219-223873096 Lactuca sativa
Lsat_1_v5_gn_5_105541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 223872097-223873096 Lactuca sativa
Lsat_1_v5_gn_5_105541 2.0kb upstream 2.0kb upstream 5878   true Lsat_1_v8_lg_5: 223866219-223872096 Lactuca sativa
Lsat_1_v5_gn_5_105541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 223866219-223868218 Lactuca sativa
Lsat_1_v5_gn_5_105541 2.0kb downstream 2.0kb downstream 5878   true Lsat_1_v8_lg_5: 223868219-223874096 Lactuca sativa
Lsat_1_v5_gn_5_105541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 223872097-223874096 Lactuca sativa
Lsat_1_v5_gn_5_105541 5.0kb upstream 5.0kb upstream 8878   true Lsat_1_v8_lg_5: 223863219-223872096 Lactuca sativa
Lsat_1_v5_gn_5_105541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 223863219-223868218 Lactuca sativa
Lsat_1_v5_gn_5_105541 5.0kb downstream 5.0kb downstream 8878   true Lsat_1_v8_lg_5: 223868219-223877096 Lactuca sativa
Lsat_1_v5_gn_5_105541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 223872097-223877096 Lactuca sativa
Lsat_1_v5_gn_5_105541 10.0kb upstream 10.0kb upstream 13878   true Lsat_1_v8_lg_5: 223858219-223872096 Lactuca sativa
Lsat_1_v5_gn_5_105541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 223858219-223868218 Lactuca sativa
Lsat_1_v5_gn_5_105541 10.0kb downstream 10.0kb downstream 13878   true Lsat_1_v8_lg_5: 223868219-223882096 Lactuca sativa
Lsat_1_v5_gn_5_105541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 223872097-223882096 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027715 5273 Angiosperm View MSA
121480702 5263 Asterids View MSA
123745107 5271 Pentapetalae View MSA
122785830 5272 Eudicot View MSA
121344293 5274 Embryophyte View MSA
123426211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain