Gene : Lsat_1_v5_gn_5_105260 L. sativa V8
Defline:  (1 of 1) PTHR22981//PTHR22981:SF54 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 2, MITOCHONDRIAL-RELATED Genomic Order:  2770
Name:  ? Lsat_1_v5_gn_5_105260 Secondary Identifier:  ? PAC:38964565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_105260 0.5kb upstream 0.5kb upstream 1923   true Lsat_1_v8_lg_5: 224313881-224315803 Lactuca sativa
Lsat_1_v5_gn_5_105260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 224315304-224315803 Lactuca sativa
Lsat_1_v5_gn_5_105260 0.5kb downstream 0.5kb downstream 1923   true Lsat_1_v8_lg_5: 224313381-224315303 Lactuca sativa
Lsat_1_v5_gn_5_105260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 224313381-224313880 Lactuca sativa
Lsat_1_v5_gn_5_105260 1.0kb upstream 1.0kb upstream 2423   true Lsat_1_v8_lg_5: 224313881-224316303 Lactuca sativa
Lsat_1_v5_gn_5_105260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 224315304-224316303 Lactuca sativa
Lsat_1_v5_gn_5_105260 1.0kb downstream 1.0kb downstream 2423   true Lsat_1_v8_lg_5: 224312881-224315303 Lactuca sativa
Lsat_1_v5_gn_5_105260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 224312881-224313880 Lactuca sativa
Lsat_1_v5_gn_5_105260 2.0kb upstream 2.0kb upstream 3423   true Lsat_1_v8_lg_5: 224313881-224317303 Lactuca sativa
Lsat_1_v5_gn_5_105260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 224315304-224317303 Lactuca sativa
Lsat_1_v5_gn_5_105260 2.0kb downstream 2.0kb downstream 3423   true Lsat_1_v8_lg_5: 224311881-224315303 Lactuca sativa
Lsat_1_v5_gn_5_105260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 224311881-224313880 Lactuca sativa
Lsat_1_v5_gn_5_105260 5.0kb upstream 5.0kb upstream 6423   true Lsat_1_v8_lg_5: 224313881-224320303 Lactuca sativa
Lsat_1_v5_gn_5_105260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 224315304-224320303 Lactuca sativa
Lsat_1_v5_gn_5_105260 5.0kb downstream 5.0kb downstream 6423   true Lsat_1_v8_lg_5: 224308881-224315303 Lactuca sativa
Lsat_1_v5_gn_5_105260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 224308881-224313880 Lactuca sativa
Lsat_1_v5_gn_5_105260 10.0kb upstream 10.0kb upstream 11423   true Lsat_1_v8_lg_5: 224313881-224325303 Lactuca sativa
Lsat_1_v5_gn_5_105260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 224315304-224325303 Lactuca sativa
Lsat_1_v5_gn_5_105260 10.0kb downstream 10.0kb downstream 11423   true Lsat_1_v8_lg_5: 224303881-224315303 Lactuca sativa
Lsat_1_v5_gn_5_105260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 224303881-224313880 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469878 5263 Asterids View MSA
123738256 5271 Pentapetalae View MSA
122793894 5272 Eudicot View MSA
122043282 5273 Angiosperm View MSA
121346771 5274 Embryophyte View MSA
123380441 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain