Gene : Lsat_1_v5_gn_5_106560 L. sativa V8
Defline:  (1 of 2) K01590 - histidine decarboxylase (hdc, HDC) Genomic Order:  2809
Name:  ? Lsat_1_v5_gn_5_106560 Secondary Identifier:  ? PAC:38971836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_106560 0.5kb upstream 0.5kb upstream 4326   true Lsat_1_v8_lg_5: 226744492-226748817 Lactuca sativa
Lsat_1_v5_gn_5_106560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 226744492-226744991 Lactuca sativa
Lsat_1_v5_gn_5_106560 0.5kb downstream 0.5kb downstream 4326   true Lsat_1_v8_lg_5: 226744992-226749317 Lactuca sativa
Lsat_1_v5_gn_5_106560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 226748818-226749317 Lactuca sativa
Lsat_1_v5_gn_5_106560 1.0kb upstream 1.0kb upstream 4826   true Lsat_1_v8_lg_5: 226743992-226748817 Lactuca sativa
Lsat_1_v5_gn_5_106560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 226743992-226744991 Lactuca sativa
Lsat_1_v5_gn_5_106560 1.0kb downstream 1.0kb downstream 4826   true Lsat_1_v8_lg_5: 226744992-226749817 Lactuca sativa
Lsat_1_v5_gn_5_106560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 226748818-226749817 Lactuca sativa
Lsat_1_v5_gn_5_106560 2.0kb upstream 2.0kb upstream 5826   true Lsat_1_v8_lg_5: 226742992-226748817 Lactuca sativa
Lsat_1_v5_gn_5_106560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 226742992-226744991 Lactuca sativa
Lsat_1_v5_gn_5_106560 2.0kb downstream 2.0kb downstream 5826   true Lsat_1_v8_lg_5: 226744992-226750817 Lactuca sativa
Lsat_1_v5_gn_5_106560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 226748818-226750817 Lactuca sativa
Lsat_1_v5_gn_5_106560 5.0kb upstream 5.0kb upstream 8826   true Lsat_1_v8_lg_5: 226739992-226748817 Lactuca sativa
Lsat_1_v5_gn_5_106560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 226739992-226744991 Lactuca sativa
Lsat_1_v5_gn_5_106560 5.0kb downstream 5.0kb downstream 8826   true Lsat_1_v8_lg_5: 226744992-226753817 Lactuca sativa
Lsat_1_v5_gn_5_106560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 226748818-226753817 Lactuca sativa
Lsat_1_v5_gn_5_106560 10.0kb upstream 10.0kb upstream 13826   true Lsat_1_v8_lg_5: 226734992-226748817 Lactuca sativa
Lsat_1_v5_gn_5_106560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 226734992-226744991 Lactuca sativa
Lsat_1_v5_gn_5_106560 10.0kb downstream 10.0kb downstream 13826   true Lsat_1_v8_lg_5: 226744992-226758817 Lactuca sativa
Lsat_1_v5_gn_5_106560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 226748818-226758817 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466482 5263 Asterids View MSA
123736522 5271 Pentapetalae View MSA
122789844 5272 Eudicot View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain