Gene : Lsat_1_v5_gn_5_107520 L. sativa V8
Defline:  (1 of 25) PF02469 - Fasciclin domain (Fasciclin) Genomic Order:  2791
Name:  ? Lsat_1_v5_gn_5_107520 Secondary Identifier:  ? PAC:38963855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_107520 0.5kb upstream 0.5kb upstream 1829   true Lsat_1_v8_lg_5: 225893446-225895274 Lactuca sativa
Lsat_1_v5_gn_5_107520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 225894775-225895274 Lactuca sativa
Lsat_1_v5_gn_5_107520 0.5kb downstream 0.5kb downstream 1829   true Lsat_1_v8_lg_5: 225892946-225894774 Lactuca sativa
Lsat_1_v5_gn_5_107520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 225892946-225893445 Lactuca sativa
Lsat_1_v5_gn_5_107520 1.0kb upstream 1.0kb upstream 2329   true Lsat_1_v8_lg_5: 225893446-225895774 Lactuca sativa
Lsat_1_v5_gn_5_107520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 225894775-225895774 Lactuca sativa
Lsat_1_v5_gn_5_107520 1.0kb downstream 1.0kb downstream 2329   true Lsat_1_v8_lg_5: 225892446-225894774 Lactuca sativa
Lsat_1_v5_gn_5_107520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 225892446-225893445 Lactuca sativa
Lsat_1_v5_gn_5_107520 2.0kb upstream 2.0kb upstream 3329   true Lsat_1_v8_lg_5: 225893446-225896774 Lactuca sativa
Lsat_1_v5_gn_5_107520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 225894775-225896774 Lactuca sativa
Lsat_1_v5_gn_5_107520 2.0kb downstream 2.0kb downstream 3329   true Lsat_1_v8_lg_5: 225891446-225894774 Lactuca sativa
Lsat_1_v5_gn_5_107520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 225891446-225893445 Lactuca sativa
Lsat_1_v5_gn_5_107520 5.0kb upstream 5.0kb upstream 6329   true Lsat_1_v8_lg_5: 225893446-225899774 Lactuca sativa
Lsat_1_v5_gn_5_107520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 225894775-225899774 Lactuca sativa
Lsat_1_v5_gn_5_107520 5.0kb downstream 5.0kb downstream 6329   true Lsat_1_v8_lg_5: 225888446-225894774 Lactuca sativa
Lsat_1_v5_gn_5_107520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 225888446-225893445 Lactuca sativa
Lsat_1_v5_gn_5_107520 10.0kb upstream 10.0kb upstream 11329   true Lsat_1_v8_lg_5: 225893446-225904774 Lactuca sativa
Lsat_1_v5_gn_5_107520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 225894775-225904774 Lactuca sativa
Lsat_1_v5_gn_5_107520 10.0kb downstream 10.0kb downstream 11329   true Lsat_1_v8_lg_5: 225883446-225894774 Lactuca sativa
Lsat_1_v5_gn_5_107520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 225883446-225893445 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464630 5263 Asterids View MSA
123753187 5271 Pentapetalae View MSA
122794600 5272 Eudicot View MSA
122049688 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain