Gene : Lsat_1_v5_gn_5_108001 L. sativa V8
Defline:  (1 of 11) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  2845
Name:  ? Lsat_1_v5_gn_5_108001 Secondary Identifier:  ? PAC:38967005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_108001 0.5kb upstream 0.5kb upstream 2692   true Lsat_1_v8_lg_5: 227720052-227722743 Lactuca sativa
Lsat_1_v5_gn_5_108001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 227722244-227722743 Lactuca sativa
Lsat_1_v5_gn_5_108001 0.5kb downstream 0.5kb downstream 2692   true Lsat_1_v8_lg_5: 227719552-227722243 Lactuca sativa
Lsat_1_v5_gn_5_108001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 227719552-227720051 Lactuca sativa
Lsat_1_v5_gn_5_108001 1.0kb upstream 1.0kb upstream 3192   true Lsat_1_v8_lg_5: 227720052-227723243 Lactuca sativa
Lsat_1_v5_gn_5_108001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 227722244-227723243 Lactuca sativa
Lsat_1_v5_gn_5_108001 1.0kb downstream 1.0kb downstream 3192   true Lsat_1_v8_lg_5: 227719052-227722243 Lactuca sativa
Lsat_1_v5_gn_5_108001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 227719052-227720051 Lactuca sativa
Lsat_1_v5_gn_5_108001 2.0kb upstream 2.0kb upstream 4192   true Lsat_1_v8_lg_5: 227720052-227724243 Lactuca sativa
Lsat_1_v5_gn_5_108001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 227722244-227724243 Lactuca sativa
Lsat_1_v5_gn_5_108001 2.0kb downstream 2.0kb downstream 4192   true Lsat_1_v8_lg_5: 227718052-227722243 Lactuca sativa
Lsat_1_v5_gn_5_108001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 227718052-227720051 Lactuca sativa
Lsat_1_v5_gn_5_108001 5.0kb upstream 5.0kb upstream 7192   true Lsat_1_v8_lg_5: 227720052-227727243 Lactuca sativa
Lsat_1_v5_gn_5_108001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 227722244-227727243 Lactuca sativa
Lsat_1_v5_gn_5_108001 5.0kb downstream 5.0kb downstream 7192   true Lsat_1_v8_lg_5: 227715052-227722243 Lactuca sativa
Lsat_1_v5_gn_5_108001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 227715052-227720051 Lactuca sativa
Lsat_1_v5_gn_5_108001 10.0kb upstream 10.0kb upstream 12192   true Lsat_1_v8_lg_5: 227720052-227732243 Lactuca sativa
Lsat_1_v5_gn_5_108001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 227722244-227732243 Lactuca sativa
Lsat_1_v5_gn_5_108001 10.0kb downstream 10.0kb downstream 12192   true Lsat_1_v8_lg_5: 227710052-227722243 Lactuca sativa
Lsat_1_v5_gn_5_108001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227710052-227720051 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480360 5263 Asterids View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain