Gene : Lsat_1_v5_gn_5_108021 L. sativa V8
Defline:  (1 of 2) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT) Genomic Order:  2846
Name:  ? Lsat_1_v5_gn_5_108021 Secondary Identifier:  ? PAC:38966585
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6351 Lactuca sativa pathologic  
Lsativa PWY-6352 Lactuca sativa pathologic  
Lsativa PWY-7625 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_108021 0.5kb upstream 0.5kb upstream 4610   true Lsat_1_v8_lg_5: 227751200-227755809 Lactuca sativa
Lsat_1_v5_gn_5_108021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 227755310-227755809 Lactuca sativa
Lsat_1_v5_gn_5_108021 0.5kb downstream 0.5kb downstream 4610   true Lsat_1_v8_lg_5: 227750700-227755309 Lactuca sativa
Lsat_1_v5_gn_5_108021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 227750700-227751199 Lactuca sativa
Lsat_1_v5_gn_5_108021 1.0kb upstream 1.0kb upstream 5110   true Lsat_1_v8_lg_5: 227751200-227756309 Lactuca sativa
Lsat_1_v5_gn_5_108021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 227755310-227756309 Lactuca sativa
Lsat_1_v5_gn_5_108021 1.0kb downstream 1.0kb downstream 5110   true Lsat_1_v8_lg_5: 227750200-227755309 Lactuca sativa
Lsat_1_v5_gn_5_108021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 227750200-227751199 Lactuca sativa
Lsat_1_v5_gn_5_108021 2.0kb upstream 2.0kb upstream 6110   true Lsat_1_v8_lg_5: 227751200-227757309 Lactuca sativa
Lsat_1_v5_gn_5_108021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 227755310-227757309 Lactuca sativa
Lsat_1_v5_gn_5_108021 2.0kb downstream 2.0kb downstream 6110   true Lsat_1_v8_lg_5: 227749200-227755309 Lactuca sativa
Lsat_1_v5_gn_5_108021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 227749200-227751199 Lactuca sativa
Lsat_1_v5_gn_5_108021 5.0kb upstream 5.0kb upstream 9110   true Lsat_1_v8_lg_5: 227751200-227760309 Lactuca sativa
Lsat_1_v5_gn_5_108021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 227755310-227760309 Lactuca sativa
Lsat_1_v5_gn_5_108021 5.0kb downstream 5.0kb downstream 9110   true Lsat_1_v8_lg_5: 227746200-227755309 Lactuca sativa
Lsat_1_v5_gn_5_108021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 227746200-227751199 Lactuca sativa
Lsat_1_v5_gn_5_108021 10.0kb upstream 10.0kb upstream 14110   true Lsat_1_v8_lg_5: 227751200-227765309 Lactuca sativa
Lsat_1_v5_gn_5_108021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 227755310-227765309 Lactuca sativa
Lsat_1_v5_gn_5_108021 10.0kb downstream 10.0kb downstream 14110   true Lsat_1_v8_lg_5: 227741200-227755309 Lactuca sativa
Lsat_1_v5_gn_5_108021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227741200-227751199 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469473 5263 Asterids View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain