Gene : Lsat_1_v5_gn_5_107980 L. sativa V8
Genomic Order:  2844 Name:  ? Lsat_1_v5_gn_5_107980
Secondary Identifier:  ? PAC:38966629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_107980 0.5kb upstream 0.5kb upstream 5369   true Lsat_1_v8_lg_5: 227703942-227709310 Lactuca sativa
Lsat_1_v5_gn_5_107980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 227703942-227704441 Lactuca sativa
Lsat_1_v5_gn_5_107980 0.5kb downstream 0.5kb downstream 5369   true Lsat_1_v8_lg_5: 227704442-227709810 Lactuca sativa
Lsat_1_v5_gn_5_107980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 227709311-227709810 Lactuca sativa
Lsat_1_v5_gn_5_107980 1.0kb upstream 1.0kb upstream 5869   true Lsat_1_v8_lg_5: 227703442-227709310 Lactuca sativa
Lsat_1_v5_gn_5_107980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 227703442-227704441 Lactuca sativa
Lsat_1_v5_gn_5_107980 1.0kb downstream 1.0kb downstream 5869   true Lsat_1_v8_lg_5: 227704442-227710310 Lactuca sativa
Lsat_1_v5_gn_5_107980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 227709311-227710310 Lactuca sativa
Lsat_1_v5_gn_5_107980 2.0kb upstream 2.0kb upstream 6869   true Lsat_1_v8_lg_5: 227702442-227709310 Lactuca sativa
Lsat_1_v5_gn_5_107980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 227702442-227704441 Lactuca sativa
Lsat_1_v5_gn_5_107980 2.0kb downstream 2.0kb downstream 6869   true Lsat_1_v8_lg_5: 227704442-227711310 Lactuca sativa
Lsat_1_v5_gn_5_107980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 227709311-227711310 Lactuca sativa
Lsat_1_v5_gn_5_107980 5.0kb upstream 5.0kb upstream 9869   true Lsat_1_v8_lg_5: 227699442-227709310 Lactuca sativa
Lsat_1_v5_gn_5_107980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 227699442-227704441 Lactuca sativa
Lsat_1_v5_gn_5_107980 5.0kb downstream 5.0kb downstream 9869   true Lsat_1_v8_lg_5: 227704442-227714310 Lactuca sativa
Lsat_1_v5_gn_5_107980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 227709311-227714310 Lactuca sativa
Lsat_1_v5_gn_5_107980 10.0kb upstream 10.0kb upstream 14869   true Lsat_1_v8_lg_5: 227694442-227709310 Lactuca sativa
Lsat_1_v5_gn_5_107980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 227694442-227704441 Lactuca sativa
Lsat_1_v5_gn_5_107980 10.0kb downstream 10.0kb downstream 14869   true Lsat_1_v8_lg_5: 227704442-227719310 Lactuca sativa
Lsat_1_v5_gn_5_107980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227709311-227719310 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467735 5263 Asterids View MSA
123750982 5271 Pentapetalae View MSA
122787370 5272 Eudicot View MSA
122050728 5273 Angiosperm View MSA
121345298 5274 Embryophyte View MSA
123380189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain