Gene : Lsat_1_v5_gn_5_107881 L. sativa V8
Defline:  (1 of 2) K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Genomic Order:  2840
Name:  ? Lsat_1_v5_gn_5_107881 Secondary Identifier:  ? PAC:38964803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_107881 0.5kb upstream 0.5kb upstream 4826   true Lsat_1_v8_lg_5: 227609661-227614486 Lactuca sativa
Lsat_1_v5_gn_5_107881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 227613987-227614486 Lactuca sativa
Lsat_1_v5_gn_5_107881 0.5kb downstream 0.5kb downstream 4826   true Lsat_1_v8_lg_5: 227609161-227613986 Lactuca sativa
Lsat_1_v5_gn_5_107881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 227609161-227609660 Lactuca sativa
Lsat_1_v5_gn_5_107881 1.0kb upstream 1.0kb upstream 5326   true Lsat_1_v8_lg_5: 227609661-227614986 Lactuca sativa
Lsat_1_v5_gn_5_107881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 227613987-227614986 Lactuca sativa
Lsat_1_v5_gn_5_107881 1.0kb downstream 1.0kb downstream 5326   true Lsat_1_v8_lg_5: 227608661-227613986 Lactuca sativa
Lsat_1_v5_gn_5_107881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 227608661-227609660 Lactuca sativa
Lsat_1_v5_gn_5_107881 2.0kb upstream 2.0kb upstream 6326   true Lsat_1_v8_lg_5: 227609661-227615986 Lactuca sativa
Lsat_1_v5_gn_5_107881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 227613987-227615986 Lactuca sativa
Lsat_1_v5_gn_5_107881 2.0kb downstream 2.0kb downstream 6326   true Lsat_1_v8_lg_5: 227607661-227613986 Lactuca sativa
Lsat_1_v5_gn_5_107881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 227607661-227609660 Lactuca sativa
Lsat_1_v5_gn_5_107881 5.0kb upstream 5.0kb upstream 9326   true Lsat_1_v8_lg_5: 227609661-227618986 Lactuca sativa
Lsat_1_v5_gn_5_107881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 227613987-227618986 Lactuca sativa
Lsat_1_v5_gn_5_107881 5.0kb downstream 5.0kb downstream 9326   true Lsat_1_v8_lg_5: 227604661-227613986 Lactuca sativa
Lsat_1_v5_gn_5_107881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 227604661-227609660 Lactuca sativa
Lsat_1_v5_gn_5_107881 10.0kb upstream 10.0kb upstream 14326   true Lsat_1_v8_lg_5: 227609661-227623986 Lactuca sativa
Lsat_1_v5_gn_5_107881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 227613987-227623986 Lactuca sativa
Lsat_1_v5_gn_5_107881 10.0kb downstream 10.0kb downstream 14326   true Lsat_1_v8_lg_5: 227599661-227613986 Lactuca sativa
Lsat_1_v5_gn_5_107881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227599661-227609660 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478675 5263 Asterids View MSA
123749945 5271 Pentapetalae View MSA
122787648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain