Gene : Lsat_1_v5_gn_5_107040 L. sativa V8
Defline:  (1 of 1) K08917 - light-harvesting complex II chlorophyll a/b binding protein 6 (LHCB6) Genomic Order:  2824
Name:  ? Lsat_1_v5_gn_5_107040 Secondary Identifier:  ? PAC:38967265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_107040 0.5kb upstream 0.5kb upstream 1644   true Lsat_1_v8_lg_5: 227240587-227242230 Lactuca sativa
Lsat_1_v5_gn_5_107040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 227240587-227241086 Lactuca sativa
Lsat_1_v5_gn_5_107040 0.5kb downstream 0.5kb downstream 1644   true Lsat_1_v8_lg_5: 227241087-227242730 Lactuca sativa
Lsat_1_v5_gn_5_107040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 227242231-227242730 Lactuca sativa
Lsat_1_v5_gn_5_107040 1.0kb upstream 1.0kb upstream 2144   true Lsat_1_v8_lg_5: 227240087-227242230 Lactuca sativa
Lsat_1_v5_gn_5_107040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 227240087-227241086 Lactuca sativa
Lsat_1_v5_gn_5_107040 1.0kb downstream 1.0kb downstream 2144   true Lsat_1_v8_lg_5: 227241087-227243230 Lactuca sativa
Lsat_1_v5_gn_5_107040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 227242231-227243230 Lactuca sativa
Lsat_1_v5_gn_5_107040 2.0kb upstream 2.0kb upstream 3144   true Lsat_1_v8_lg_5: 227239087-227242230 Lactuca sativa
Lsat_1_v5_gn_5_107040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 227239087-227241086 Lactuca sativa
Lsat_1_v5_gn_5_107040 2.0kb downstream 2.0kb downstream 3144   true Lsat_1_v8_lg_5: 227241087-227244230 Lactuca sativa
Lsat_1_v5_gn_5_107040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 227242231-227244230 Lactuca sativa
Lsat_1_v5_gn_5_107040 5.0kb upstream 5.0kb upstream 6144   true Lsat_1_v8_lg_5: 227236087-227242230 Lactuca sativa
Lsat_1_v5_gn_5_107040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 227236087-227241086 Lactuca sativa
Lsat_1_v5_gn_5_107040 5.0kb downstream 5.0kb downstream 6144   true Lsat_1_v8_lg_5: 227241087-227247230 Lactuca sativa
Lsat_1_v5_gn_5_107040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 227242231-227247230 Lactuca sativa
Lsat_1_v5_gn_5_107040 10.0kb upstream 10.0kb upstream 11144   true Lsat_1_v8_lg_5: 227231087-227242230 Lactuca sativa
Lsat_1_v5_gn_5_107040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 227231087-227241086 Lactuca sativa
Lsat_1_v5_gn_5_107040 10.0kb downstream 10.0kb downstream 11144   true Lsat_1_v8_lg_5: 227241087-227252230 Lactuca sativa
Lsat_1_v5_gn_5_107040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227242231-227252230 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469178 5263 Asterids View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain