Gene : Lsat_1_v5_gn_5_109081 L. sativa V8
Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  2874
Name:  ? Lsat_1_v5_gn_5_109081 Secondary Identifier:  ? PAC:38969425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_109081 0.5kb upstream 0.5kb upstream 4565   true Lsat_1_v8_lg_5: 229329167-229333731 Lactuca sativa
Lsat_1_v5_gn_5_109081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 229333232-229333731 Lactuca sativa
Lsat_1_v5_gn_5_109081 0.5kb downstream 0.5kb downstream 4565   true Lsat_1_v8_lg_5: 229328667-229333231 Lactuca sativa
Lsat_1_v5_gn_5_109081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 229328667-229329166 Lactuca sativa
Lsat_1_v5_gn_5_109081 1.0kb upstream 1.0kb upstream 5065   true Lsat_1_v8_lg_5: 229329167-229334231 Lactuca sativa
Lsat_1_v5_gn_5_109081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 229333232-229334231 Lactuca sativa
Lsat_1_v5_gn_5_109081 1.0kb downstream 1.0kb downstream 5065   true Lsat_1_v8_lg_5: 229328167-229333231 Lactuca sativa
Lsat_1_v5_gn_5_109081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 229328167-229329166 Lactuca sativa
Lsat_1_v5_gn_5_109081 2.0kb upstream 2.0kb upstream 6065   true Lsat_1_v8_lg_5: 229329167-229335231 Lactuca sativa
Lsat_1_v5_gn_5_109081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 229333232-229335231 Lactuca sativa
Lsat_1_v5_gn_5_109081 2.0kb downstream 2.0kb downstream 6065   true Lsat_1_v8_lg_5: 229327167-229333231 Lactuca sativa
Lsat_1_v5_gn_5_109081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 229327167-229329166 Lactuca sativa
Lsat_1_v5_gn_5_109081 5.0kb upstream 5.0kb upstream 9065   true Lsat_1_v8_lg_5: 229329167-229338231 Lactuca sativa
Lsat_1_v5_gn_5_109081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 229333232-229338231 Lactuca sativa
Lsat_1_v5_gn_5_109081 5.0kb downstream 5.0kb downstream 9065   true Lsat_1_v8_lg_5: 229324167-229333231 Lactuca sativa
Lsat_1_v5_gn_5_109081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 229324167-229329166 Lactuca sativa
Lsat_1_v5_gn_5_109081 10.0kb upstream 10.0kb upstream 14065   true Lsat_1_v8_lg_5: 229329167-229343231 Lactuca sativa
Lsat_1_v5_gn_5_109081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 229333232-229343231 Lactuca sativa
Lsat_1_v5_gn_5_109081 10.0kb downstream 10.0kb downstream 14065   true Lsat_1_v8_lg_5: 229319167-229333231 Lactuca sativa
Lsat_1_v5_gn_5_109081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 229319167-229329166 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478920 5263 Asterids View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain