Gene : Lsat_1_v5_gn_5_109820 L. sativa V8
Defline:  (1 of 2) PTHR18937//PTHR18937:SF222 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2882
Name:  ? Lsat_1_v5_gn_5_109820 Secondary Identifier:  ? PAC:38965233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_109820 0.5kb upstream 0.5kb upstream 2746   true Lsat_1_v8_lg_5: 229807489-229810234 Lactuca sativa
Lsat_1_v5_gn_5_109820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 229807489-229807988 Lactuca sativa
Lsat_1_v5_gn_5_109820 0.5kb downstream 0.5kb downstream 2746   true Lsat_1_v8_lg_5: 229807989-229810734 Lactuca sativa
Lsat_1_v5_gn_5_109820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 229810235-229810734 Lactuca sativa
Lsat_1_v5_gn_5_109820 1.0kb upstream 1.0kb upstream 3246   true Lsat_1_v8_lg_5: 229806989-229810234 Lactuca sativa
Lsat_1_v5_gn_5_109820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 229806989-229807988 Lactuca sativa
Lsat_1_v5_gn_5_109820 1.0kb downstream 1.0kb downstream 3246   true Lsat_1_v8_lg_5: 229807989-229811234 Lactuca sativa
Lsat_1_v5_gn_5_109820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 229810235-229811234 Lactuca sativa
Lsat_1_v5_gn_5_109820 2.0kb upstream 2.0kb upstream 4246   true Lsat_1_v8_lg_5: 229805989-229810234 Lactuca sativa
Lsat_1_v5_gn_5_109820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 229805989-229807988 Lactuca sativa
Lsat_1_v5_gn_5_109820 2.0kb downstream 2.0kb downstream 4246   true Lsat_1_v8_lg_5: 229807989-229812234 Lactuca sativa
Lsat_1_v5_gn_5_109820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 229810235-229812234 Lactuca sativa
Lsat_1_v5_gn_5_109820 5.0kb upstream 5.0kb upstream 7246   true Lsat_1_v8_lg_5: 229802989-229810234 Lactuca sativa
Lsat_1_v5_gn_5_109820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 229802989-229807988 Lactuca sativa
Lsat_1_v5_gn_5_109820 5.0kb downstream 5.0kb downstream 7246   true Lsat_1_v8_lg_5: 229807989-229815234 Lactuca sativa
Lsat_1_v5_gn_5_109820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 229810235-229815234 Lactuca sativa
Lsat_1_v5_gn_5_109820 10.0kb upstream 10.0kb upstream 12246   true Lsat_1_v8_lg_5: 229797989-229810234 Lactuca sativa
Lsat_1_v5_gn_5_109820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 229797989-229807988 Lactuca sativa
Lsat_1_v5_gn_5_109820 10.0kb downstream 10.0kb downstream 12246   true Lsat_1_v8_lg_5: 229807989-229820234 Lactuca sativa
Lsat_1_v5_gn_5_109820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 229810235-229820234 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
121468916 5263 Asterids View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain