Gene : Lsat_1_v5_gn_5_109540 L. sativa V8
Genomic Order:  2785 Name:  ? Lsat_1_v5_gn_5_109540
Secondary Identifier:  ? PAC:38969733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_109540 0.5kb upstream 0.5kb upstream 4389   true Lsat_1_v8_lg_5: 224960166-224964554 Lactuca sativa
Lsat_1_v5_gn_5_109540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 224960166-224960665 Lactuca sativa
Lsat_1_v5_gn_5_109540 0.5kb downstream 0.5kb downstream 4389   true Lsat_1_v8_lg_5: 224960666-224965054 Lactuca sativa
Lsat_1_v5_gn_5_109540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 224964555-224965054 Lactuca sativa
Lsat_1_v5_gn_5_109540 1.0kb upstream 1.0kb upstream 4889   true Lsat_1_v8_lg_5: 224959666-224964554 Lactuca sativa
Lsat_1_v5_gn_5_109540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 224959666-224960665 Lactuca sativa
Lsat_1_v5_gn_5_109540 1.0kb downstream 1.0kb downstream 4889   true Lsat_1_v8_lg_5: 224960666-224965554 Lactuca sativa
Lsat_1_v5_gn_5_109540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 224964555-224965554 Lactuca sativa
Lsat_1_v5_gn_5_109540 2.0kb upstream 2.0kb upstream 5889   true Lsat_1_v8_lg_5: 224958666-224964554 Lactuca sativa
Lsat_1_v5_gn_5_109540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 224958666-224960665 Lactuca sativa
Lsat_1_v5_gn_5_109540 2.0kb downstream 2.0kb downstream 5889   true Lsat_1_v8_lg_5: 224960666-224966554 Lactuca sativa
Lsat_1_v5_gn_5_109540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 224964555-224966554 Lactuca sativa
Lsat_1_v5_gn_5_109540 5.0kb upstream 5.0kb upstream 8889   true Lsat_1_v8_lg_5: 224955666-224964554 Lactuca sativa
Lsat_1_v5_gn_5_109540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 224955666-224960665 Lactuca sativa
Lsat_1_v5_gn_5_109540 5.0kb downstream 5.0kb downstream 8889   true Lsat_1_v8_lg_5: 224960666-224969554 Lactuca sativa
Lsat_1_v5_gn_5_109540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 224964555-224969554 Lactuca sativa
Lsat_1_v5_gn_5_109540 10.0kb upstream 10.0kb upstream 13889   true Lsat_1_v8_lg_5: 224950666-224964554 Lactuca sativa
Lsat_1_v5_gn_5_109540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 224950666-224960665 Lactuca sativa
Lsat_1_v5_gn_5_109540 10.0kb downstream 10.0kb downstream 13889   true Lsat_1_v8_lg_5: 224960666-224974554 Lactuca sativa
Lsat_1_v5_gn_5_109540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 224964555-224974554 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478095 5263 Asterids View MSA
123746861 5271 Pentapetalae View MSA
122787160 5272 Eudicot View MSA
122049773 5273 Angiosperm View MSA
121345275 5274 Embryophyte View MSA
123425777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain