Gene : Lsat_1_v5_gn_5_110760 L. sativa V8
Defline:  (1 of 3) 1.2.1.70 - Glutamyl-tRNA reductase Genomic Order:  2906
Name:  ? Lsat_1_v5_gn_5_110760 Secondary Identifier:  ? PAC:38967582
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5188 Lactuca sativa pathologic  
Lsativa PWY-5918 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_110760 0.5kb upstream 0.5kb upstream 3023   true Lsat_1_v8_lg_5: 230446616-230449638 Lactuca sativa
Lsat_1_v5_gn_5_110760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 230446616-230447115 Lactuca sativa
Lsat_1_v5_gn_5_110760 0.5kb downstream 0.5kb downstream 3023   true Lsat_1_v8_lg_5: 230447116-230450138 Lactuca sativa
Lsat_1_v5_gn_5_110760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 230449639-230450138 Lactuca sativa
Lsat_1_v5_gn_5_110760 1.0kb upstream 1.0kb upstream 3523   true Lsat_1_v8_lg_5: 230446116-230449638 Lactuca sativa
Lsat_1_v5_gn_5_110760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 230446116-230447115 Lactuca sativa
Lsat_1_v5_gn_5_110760 1.0kb downstream 1.0kb downstream 3523   true Lsat_1_v8_lg_5: 230447116-230450638 Lactuca sativa
Lsat_1_v5_gn_5_110760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 230449639-230450638 Lactuca sativa
Lsat_1_v5_gn_5_110760 2.0kb upstream 2.0kb upstream 4523   true Lsat_1_v8_lg_5: 230445116-230449638 Lactuca sativa
Lsat_1_v5_gn_5_110760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 230445116-230447115 Lactuca sativa
Lsat_1_v5_gn_5_110760 2.0kb downstream 2.0kb downstream 4523   true Lsat_1_v8_lg_5: 230447116-230451638 Lactuca sativa
Lsat_1_v5_gn_5_110760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 230449639-230451638 Lactuca sativa
Lsat_1_v5_gn_5_110760 5.0kb upstream 5.0kb upstream 7523   true Lsat_1_v8_lg_5: 230442116-230449638 Lactuca sativa
Lsat_1_v5_gn_5_110760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 230442116-230447115 Lactuca sativa
Lsat_1_v5_gn_5_110760 5.0kb downstream 5.0kb downstream 7523   true Lsat_1_v8_lg_5: 230447116-230454638 Lactuca sativa
Lsat_1_v5_gn_5_110760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 230449639-230454638 Lactuca sativa
Lsat_1_v5_gn_5_110760 10.0kb upstream 10.0kb upstream 12523   true Lsat_1_v8_lg_5: 230437116-230449638 Lactuca sativa
Lsat_1_v5_gn_5_110760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 230437116-230447115 Lactuca sativa
Lsat_1_v5_gn_5_110760 10.0kb downstream 10.0kb downstream 12523   true Lsat_1_v8_lg_5: 230447116-230459638 Lactuca sativa
Lsat_1_v5_gn_5_110760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 230449639-230459638 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782240 5273 Angiosperm View MSA
121470981 5263 Asterids View MSA
123752307 5271 Pentapetalae View MSA
122774475 5272 Eudicot View MSA
121053773 5274 Embryophyte View MSA
123093781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain