Gene : Lsat_1_v5_gn_4_69980 L. sativa V8
Defline:  (1 of 3) PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Genomic Order:  2101
Name:  ? Lsat_1_v5_gn_4_69980 Secondary Identifier:  ? PAC:38930357
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_69980 0.5kb upstream 0.5kb upstream 3145   true Lsat_1_v8_lg_4: 111567111-111570255 Lactuca sativa
Lsat_1_v5_gn_4_69980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 111567111-111567610 Lactuca sativa
Lsat_1_v5_gn_4_69980 0.5kb downstream 0.5kb downstream 3145   true Lsat_1_v8_lg_4: 111567611-111570755 Lactuca sativa
Lsat_1_v5_gn_4_69980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 111570256-111570755 Lactuca sativa
Lsat_1_v5_gn_4_69980 1.0kb upstream 1.0kb upstream 3645   true Lsat_1_v8_lg_4: 111566611-111570255 Lactuca sativa
Lsat_1_v5_gn_4_69980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 111566611-111567610 Lactuca sativa
Lsat_1_v5_gn_4_69980 1.0kb downstream 1.0kb downstream 3645   true Lsat_1_v8_lg_4: 111567611-111571255 Lactuca sativa
Lsat_1_v5_gn_4_69980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 111570256-111571255 Lactuca sativa
Lsat_1_v5_gn_4_69980 2.0kb upstream 2.0kb upstream 4645   true Lsat_1_v8_lg_4: 111565611-111570255 Lactuca sativa
Lsat_1_v5_gn_4_69980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 111565611-111567610 Lactuca sativa
Lsat_1_v5_gn_4_69980 2.0kb downstream 2.0kb downstream 4645   true Lsat_1_v8_lg_4: 111567611-111572255 Lactuca sativa
Lsat_1_v5_gn_4_69980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 111570256-111572255 Lactuca sativa
Lsat_1_v5_gn_4_69980 5.0kb upstream 5.0kb upstream 7645   true Lsat_1_v8_lg_4: 111562611-111570255 Lactuca sativa
Lsat_1_v5_gn_4_69980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 111562611-111567610 Lactuca sativa
Lsat_1_v5_gn_4_69980 5.0kb downstream 5.0kb downstream 7645   true Lsat_1_v8_lg_4: 111567611-111575255 Lactuca sativa
Lsat_1_v5_gn_4_69980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 111570256-111575255 Lactuca sativa
Lsat_1_v5_gn_4_69980 10.0kb upstream 10.0kb upstream 12645   true Lsat_1_v8_lg_4: 111557611-111570255 Lactuca sativa
Lsat_1_v5_gn_4_69980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 111557611-111567610 Lactuca sativa
Lsat_1_v5_gn_4_69980 10.0kb downstream 10.0kb downstream 12645   true Lsat_1_v8_lg_4: 111567611-111580255 Lactuca sativa
Lsat_1_v5_gn_4_69980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 111570256-111580255 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475996 5263 Asterids View MSA
123737704 5271 Pentapetalae View MSA
122792292 5272 Eudicot View MSA
122042177 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain