Gene : Lsat_1_v5_gn_4_70780 L. sativa V8
Defline:  (1 of 2) PTHR24031//PTHR24031:SF326 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Genomic Order:  2070
Name:  ? Lsat_1_v5_gn_4_70780 Secondary Identifier:  ? PAC:38929481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_70780 0.5kb upstream 0.5kb upstream 3551   true Lsat_1_v8_lg_4: 109359621-109363171 Lactuca sativa
Lsat_1_v5_gn_4_70780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 109359621-109360120 Lactuca sativa
Lsat_1_v5_gn_4_70780 0.5kb downstream 0.5kb downstream 3551   true Lsat_1_v8_lg_4: 109360121-109363671 Lactuca sativa
Lsat_1_v5_gn_4_70780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 109363172-109363671 Lactuca sativa
Lsat_1_v5_gn_4_70780 1.0kb upstream 1.0kb upstream 4051   true Lsat_1_v8_lg_4: 109359121-109363171 Lactuca sativa
Lsat_1_v5_gn_4_70780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 109359121-109360120 Lactuca sativa
Lsat_1_v5_gn_4_70780 1.0kb downstream 1.0kb downstream 4051   true Lsat_1_v8_lg_4: 109360121-109364171 Lactuca sativa
Lsat_1_v5_gn_4_70780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 109363172-109364171 Lactuca sativa
Lsat_1_v5_gn_4_70780 2.0kb upstream 2.0kb upstream 5051   true Lsat_1_v8_lg_4: 109358121-109363171 Lactuca sativa
Lsat_1_v5_gn_4_70780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 109358121-109360120 Lactuca sativa
Lsat_1_v5_gn_4_70780 2.0kb downstream 2.0kb downstream 5051   true Lsat_1_v8_lg_4: 109360121-109365171 Lactuca sativa
Lsat_1_v5_gn_4_70780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 109363172-109365171 Lactuca sativa
Lsat_1_v5_gn_4_70780 5.0kb upstream 5.0kb upstream 8051   true Lsat_1_v8_lg_4: 109355121-109363171 Lactuca sativa
Lsat_1_v5_gn_4_70780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 109355121-109360120 Lactuca sativa
Lsat_1_v5_gn_4_70780 5.0kb downstream 5.0kb downstream 8051   true Lsat_1_v8_lg_4: 109360121-109368171 Lactuca sativa
Lsat_1_v5_gn_4_70780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 109363172-109368171 Lactuca sativa
Lsat_1_v5_gn_4_70780 10.0kb upstream 10.0kb upstream 13051   true Lsat_1_v8_lg_4: 109350121-109363171 Lactuca sativa
Lsat_1_v5_gn_4_70780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 109350121-109360120 Lactuca sativa
Lsat_1_v5_gn_4_70780 10.0kb downstream 10.0kb downstream 13051   true Lsat_1_v8_lg_4: 109360121-109373171 Lactuca sativa
Lsat_1_v5_gn_4_70780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 109363172-109373171 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471325 5263 Asterids View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain