Gene : Lsat_1_v5_gn_4_74560 L. sativa V8
Defline:  (1 of 1) K13172 - serine/arginine repetitive matrix protein 2 (SRRM2, SRM300) Genomic Order:  2152
Name:  ? Lsat_1_v5_gn_4_74560 Secondary Identifier:  ? PAC:38928325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_74560 0.5kb upstream 0.5kb upstream 4872   true Lsat_1_v8_lg_4: 115941691-115946562 Lactuca sativa
Lsat_1_v5_gn_4_74560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 115941691-115942190 Lactuca sativa
Lsat_1_v5_gn_4_74560 0.5kb downstream 0.5kb downstream 4872   true Lsat_1_v8_lg_4: 115942191-115947062 Lactuca sativa
Lsat_1_v5_gn_4_74560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 115946563-115947062 Lactuca sativa
Lsat_1_v5_gn_4_74560 1.0kb upstream 1.0kb upstream 5372   true Lsat_1_v8_lg_4: 115941191-115946562 Lactuca sativa
Lsat_1_v5_gn_4_74560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 115941191-115942190 Lactuca sativa
Lsat_1_v5_gn_4_74560 1.0kb downstream 1.0kb downstream 5372   true Lsat_1_v8_lg_4: 115942191-115947562 Lactuca sativa
Lsat_1_v5_gn_4_74560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 115946563-115947562 Lactuca sativa
Lsat_1_v5_gn_4_74560 2.0kb upstream 2.0kb upstream 6372   true Lsat_1_v8_lg_4: 115940191-115946562 Lactuca sativa
Lsat_1_v5_gn_4_74560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 115940191-115942190 Lactuca sativa
Lsat_1_v5_gn_4_74560 2.0kb downstream 2.0kb downstream 6372   true Lsat_1_v8_lg_4: 115942191-115948562 Lactuca sativa
Lsat_1_v5_gn_4_74560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 115946563-115948562 Lactuca sativa
Lsat_1_v5_gn_4_74560 5.0kb upstream 5.0kb upstream 9372   true Lsat_1_v8_lg_4: 115937191-115946562 Lactuca sativa
Lsat_1_v5_gn_4_74560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 115937191-115942190 Lactuca sativa
Lsat_1_v5_gn_4_74560 5.0kb downstream 5.0kb downstream 9372   true Lsat_1_v8_lg_4: 115942191-115951562 Lactuca sativa
Lsat_1_v5_gn_4_74560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 115946563-115951562 Lactuca sativa
Lsat_1_v5_gn_4_74560 10.0kb upstream 10.0kb upstream 14372   true Lsat_1_v8_lg_4: 115932191-115946562 Lactuca sativa
Lsat_1_v5_gn_4_74560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 115932191-115942190 Lactuca sativa
Lsat_1_v5_gn_4_74560 10.0kb downstream 10.0kb downstream 14372   true Lsat_1_v8_lg_4: 115942191-115956562 Lactuca sativa
Lsat_1_v5_gn_4_74560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 115946563-115956562 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475017 5263 Asterids View MSA
123741456 5271 Pentapetalae View MSA
122788906 5272 Eudicot View MSA
122043009 5273 Angiosperm View MSA
121350185 5274 Embryophyte View MSA
123426025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain