Gene : Lsat_1_v5_gn_4_74461 L. sativa V8
Defline:  (1 of 1) PTHR11709//PTHR11709:SF28 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  2177
Name:  ? Lsat_1_v5_gn_4_74461 Secondary Identifier:  ? PAC:38935009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5466 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_74461 0.5kb upstream 0.5kb upstream 2967   true Lsat_1_v8_lg_4: 117236041-117239007 Lactuca sativa
Lsat_1_v5_gn_4_74461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 117236041-117236540 Lactuca sativa
Lsat_1_v5_gn_4_74461 0.5kb downstream 0.5kb downstream 2967   true Lsat_1_v8_lg_4: 117236541-117239507 Lactuca sativa
Lsat_1_v5_gn_4_74461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 117239008-117239507 Lactuca sativa
Lsat_1_v5_gn_4_74461 1.0kb upstream 1.0kb upstream 3467   true Lsat_1_v8_lg_4: 117235541-117239007 Lactuca sativa
Lsat_1_v5_gn_4_74461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 117235541-117236540 Lactuca sativa
Lsat_1_v5_gn_4_74461 1.0kb downstream 1.0kb downstream 3467   true Lsat_1_v8_lg_4: 117236541-117240007 Lactuca sativa
Lsat_1_v5_gn_4_74461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 117239008-117240007 Lactuca sativa
Lsat_1_v5_gn_4_74461 2.0kb upstream 2.0kb upstream 4467   true Lsat_1_v8_lg_4: 117234541-117239007 Lactuca sativa
Lsat_1_v5_gn_4_74461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 117234541-117236540 Lactuca sativa
Lsat_1_v5_gn_4_74461 2.0kb downstream 2.0kb downstream 4467   true Lsat_1_v8_lg_4: 117236541-117241007 Lactuca sativa
Lsat_1_v5_gn_4_74461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 117239008-117241007 Lactuca sativa
Lsat_1_v5_gn_4_74461 5.0kb upstream 5.0kb upstream 7467   true Lsat_1_v8_lg_4: 117231541-117239007 Lactuca sativa
Lsat_1_v5_gn_4_74461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 117231541-117236540 Lactuca sativa
Lsat_1_v5_gn_4_74461 5.0kb downstream 5.0kb downstream 7467   true Lsat_1_v8_lg_4: 117236541-117244007 Lactuca sativa
Lsat_1_v5_gn_4_74461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 117239008-117244007 Lactuca sativa
Lsat_1_v5_gn_4_74461 10.0kb upstream 10.0kb upstream 12467   true Lsat_1_v8_lg_4: 117226541-117239007 Lactuca sativa
Lsat_1_v5_gn_4_74461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 117226541-117236540 Lactuca sativa
Lsat_1_v5_gn_4_74461 10.0kb downstream 10.0kb downstream 12467   true Lsat_1_v8_lg_4: 117236541-117249007 Lactuca sativa
Lsat_1_v5_gn_4_74461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 117239008-117249007 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476034 5263 Asterids View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain