Gene : Lsat_1_v5_gn_4_76400 L. sativa V8
Defline:  (1 of 2) PTHR12506//PTHR12506:SF20 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43 Genomic Order:  2288
Name:  ? Lsat_1_v5_gn_4_76400 Secondary Identifier:  ? PAC:38928198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_76400 0.5kb upstream 0.5kb upstream 3612   true Lsat_1_v8_lg_4: 123964351-123967962 Lactuca sativa
Lsat_1_v5_gn_4_76400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 123964351-123964850 Lactuca sativa
Lsat_1_v5_gn_4_76400 0.5kb downstream 0.5kb downstream 3612   true Lsat_1_v8_lg_4: 123964851-123968462 Lactuca sativa
Lsat_1_v5_gn_4_76400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 123967963-123968462 Lactuca sativa
Lsat_1_v5_gn_4_76400 1.0kb upstream 1.0kb upstream 4112   true Lsat_1_v8_lg_4: 123963851-123967962 Lactuca sativa
Lsat_1_v5_gn_4_76400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 123963851-123964850 Lactuca sativa
Lsat_1_v5_gn_4_76400 1.0kb downstream 1.0kb downstream 4112   true Lsat_1_v8_lg_4: 123964851-123968962 Lactuca sativa
Lsat_1_v5_gn_4_76400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 123967963-123968962 Lactuca sativa
Lsat_1_v5_gn_4_76400 2.0kb upstream 2.0kb upstream 5112   true Lsat_1_v8_lg_4: 123962851-123967962 Lactuca sativa
Lsat_1_v5_gn_4_76400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 123962851-123964850 Lactuca sativa
Lsat_1_v5_gn_4_76400 2.0kb downstream 2.0kb downstream 5112   true Lsat_1_v8_lg_4: 123964851-123969962 Lactuca sativa
Lsat_1_v5_gn_4_76400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 123967963-123969962 Lactuca sativa
Lsat_1_v5_gn_4_76400 5.0kb upstream 5.0kb upstream 8112   true Lsat_1_v8_lg_4: 123959851-123967962 Lactuca sativa
Lsat_1_v5_gn_4_76400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 123959851-123964850 Lactuca sativa
Lsat_1_v5_gn_4_76400 5.0kb downstream 5.0kb downstream 8112   true Lsat_1_v8_lg_4: 123964851-123972962 Lactuca sativa
Lsat_1_v5_gn_4_76400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 123967963-123972962 Lactuca sativa
Lsat_1_v5_gn_4_76400 10.0kb upstream 10.0kb upstream 13112   true Lsat_1_v8_lg_4: 123954851-123967962 Lactuca sativa
Lsat_1_v5_gn_4_76400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 123954851-123964850 Lactuca sativa
Lsat_1_v5_gn_4_76400 10.0kb downstream 10.0kb downstream 13112   true Lsat_1_v8_lg_4: 123964851-123977962 Lactuca sativa
Lsat_1_v5_gn_4_76400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 123967963-123977962 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468672 5263 Asterids View MSA
123746859 5271 Pentapetalae View MSA
122797489 5272 Eudicot View MSA
122049599 5273 Angiosperm View MSA
121311496 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain