Gene : Lsat_1_v5_gn_4_80721 L. sativa V8
Defline:  (1 of 1) PTHR32467//PTHR32467:SF28//PTHR32467:SF29 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Genomic Order:  2362
Name:  ? Lsat_1_v5_gn_4_80721 Secondary Identifier:  ? PAC:38929519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_80721 0.5kb upstream 0.5kb upstream 3825   true Lsat_1_v8_lg_4: 128961291-128965115 Lactuca sativa
Lsat_1_v5_gn_4_80721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 128961291-128961790 Lactuca sativa
Lsat_1_v5_gn_4_80721 0.5kb downstream 0.5kb downstream 3825   true Lsat_1_v8_lg_4: 128961791-128965615 Lactuca sativa
Lsat_1_v5_gn_4_80721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 128965116-128965615 Lactuca sativa
Lsat_1_v5_gn_4_80721 1.0kb upstream 1.0kb upstream 4325   true Lsat_1_v8_lg_4: 128960791-128965115 Lactuca sativa
Lsat_1_v5_gn_4_80721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 128960791-128961790 Lactuca sativa
Lsat_1_v5_gn_4_80721 1.0kb downstream 1.0kb downstream 4325   true Lsat_1_v8_lg_4: 128961791-128966115 Lactuca sativa
Lsat_1_v5_gn_4_80721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 128965116-128966115 Lactuca sativa
Lsat_1_v5_gn_4_80721 2.0kb upstream 2.0kb upstream 5325   true Lsat_1_v8_lg_4: 128959791-128965115 Lactuca sativa
Lsat_1_v5_gn_4_80721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 128959791-128961790 Lactuca sativa
Lsat_1_v5_gn_4_80721 2.0kb downstream 2.0kb downstream 5325   true Lsat_1_v8_lg_4: 128961791-128967115 Lactuca sativa
Lsat_1_v5_gn_4_80721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 128965116-128967115 Lactuca sativa
Lsat_1_v5_gn_4_80721 5.0kb upstream 5.0kb upstream 8325   true Lsat_1_v8_lg_4: 128956791-128965115 Lactuca sativa
Lsat_1_v5_gn_4_80721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 128956791-128961790 Lactuca sativa
Lsat_1_v5_gn_4_80721 5.0kb downstream 5.0kb downstream 8325   true Lsat_1_v8_lg_4: 128961791-128970115 Lactuca sativa
Lsat_1_v5_gn_4_80721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 128965116-128970115 Lactuca sativa
Lsat_1_v5_gn_4_80721 10.0kb upstream 10.0kb upstream 13325   true Lsat_1_v8_lg_4: 128951791-128965115 Lactuca sativa
Lsat_1_v5_gn_4_80721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 128951791-128961790 Lactuca sativa
Lsat_1_v5_gn_4_80721 10.0kb downstream 10.0kb downstream 13325   true Lsat_1_v8_lg_4: 128961791-128975115 Lactuca sativa
Lsat_1_v5_gn_4_80721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 128965116-128975115 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121443876 5263 Asterids Singleton cluster - no MSA
123753406 5271 Pentapetalae View MSA
122775094 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain