Gene : Lsat_1_v5_gn_4_80380 L. sativa V8
Defline:  (1 of 2) PF02037//PF10172 - SAP domain (SAP) // Det1 complexing ubiquitin ligase (DDA1) Genomic Order:  2348
Name:  ? Lsat_1_v5_gn_4_80380 Secondary Identifier:  ? PAC:38928507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_80380 0.5kb upstream 0.5kb upstream 2478   true Lsat_1_v8_lg_4: 127254893-127257370 Lactuca sativa
Lsat_1_v5_gn_4_80380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 127254893-127255392 Lactuca sativa
Lsat_1_v5_gn_4_80380 0.5kb downstream 0.5kb downstream 2478   true Lsat_1_v8_lg_4: 127255393-127257870 Lactuca sativa
Lsat_1_v5_gn_4_80380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 127257371-127257870 Lactuca sativa
Lsat_1_v5_gn_4_80380 1.0kb upstream 1.0kb upstream 2978   true Lsat_1_v8_lg_4: 127254393-127257370 Lactuca sativa
Lsat_1_v5_gn_4_80380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 127254393-127255392 Lactuca sativa
Lsat_1_v5_gn_4_80380 1.0kb downstream 1.0kb downstream 2978   true Lsat_1_v8_lg_4: 127255393-127258370 Lactuca sativa
Lsat_1_v5_gn_4_80380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 127257371-127258370 Lactuca sativa
Lsat_1_v5_gn_4_80380 2.0kb upstream 2.0kb upstream 3978   true Lsat_1_v8_lg_4: 127253393-127257370 Lactuca sativa
Lsat_1_v5_gn_4_80380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 127253393-127255392 Lactuca sativa
Lsat_1_v5_gn_4_80380 2.0kb downstream 2.0kb downstream 3978   true Lsat_1_v8_lg_4: 127255393-127259370 Lactuca sativa
Lsat_1_v5_gn_4_80380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 127257371-127259370 Lactuca sativa
Lsat_1_v5_gn_4_80380 5.0kb upstream 5.0kb upstream 6978   true Lsat_1_v8_lg_4: 127250393-127257370 Lactuca sativa
Lsat_1_v5_gn_4_80380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 127250393-127255392 Lactuca sativa
Lsat_1_v5_gn_4_80380 5.0kb downstream 5.0kb downstream 6978   true Lsat_1_v8_lg_4: 127255393-127262370 Lactuca sativa
Lsat_1_v5_gn_4_80380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 127257371-127262370 Lactuca sativa
Lsat_1_v5_gn_4_80380 10.0kb upstream 10.0kb upstream 11978   true Lsat_1_v8_lg_4: 127245393-127257370 Lactuca sativa
Lsat_1_v5_gn_4_80380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 127245393-127255392 Lactuca sativa
Lsat_1_v5_gn_4_80380 10.0kb downstream 10.0kb downstream 11978   true Lsat_1_v8_lg_4: 127255393-127267370 Lactuca sativa
Lsat_1_v5_gn_4_80380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 127257371-127267370 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468233 5263 Asterids View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain