Gene : Lsat_1_v5_gn_4_82740 L. sativa V8
Defline:  (1 of 3) PTHR12300//PTHR12300:SF56 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  2384
Name:  ? Lsat_1_v5_gn_4_82740 Secondary Identifier:  ? PAC:38930757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_82740 0.5kb upstream 0.5kb upstream 1488   true Lsat_1_v8_lg_4: 130878110-130879597 Lactuca sativa
Lsat_1_v5_gn_4_82740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 130878110-130878609 Lactuca sativa
Lsat_1_v5_gn_4_82740 0.5kb downstream 0.5kb downstream 1488   true Lsat_1_v8_lg_4: 130878610-130880097 Lactuca sativa
Lsat_1_v5_gn_4_82740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 130879598-130880097 Lactuca sativa
Lsat_1_v5_gn_4_82740 1.0kb upstream 1.0kb upstream 1988   true Lsat_1_v8_lg_4: 130877610-130879597 Lactuca sativa
Lsat_1_v5_gn_4_82740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 130877610-130878609 Lactuca sativa
Lsat_1_v5_gn_4_82740 1.0kb downstream 1.0kb downstream 1988   true Lsat_1_v8_lg_4: 130878610-130880597 Lactuca sativa
Lsat_1_v5_gn_4_82740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 130879598-130880597 Lactuca sativa
Lsat_1_v5_gn_4_82740 2.0kb upstream 2.0kb upstream 2988   true Lsat_1_v8_lg_4: 130876610-130879597 Lactuca sativa
Lsat_1_v5_gn_4_82740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 130876610-130878609 Lactuca sativa
Lsat_1_v5_gn_4_82740 2.0kb downstream 2.0kb downstream 2988   true Lsat_1_v8_lg_4: 130878610-130881597 Lactuca sativa
Lsat_1_v5_gn_4_82740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 130879598-130881597 Lactuca sativa
Lsat_1_v5_gn_4_82740 5.0kb upstream 5.0kb upstream 5988   true Lsat_1_v8_lg_4: 130873610-130879597 Lactuca sativa
Lsat_1_v5_gn_4_82740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 130873610-130878609 Lactuca sativa
Lsat_1_v5_gn_4_82740 5.0kb downstream 5.0kb downstream 5988   true Lsat_1_v8_lg_4: 130878610-130884597 Lactuca sativa
Lsat_1_v5_gn_4_82740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 130879598-130884597 Lactuca sativa
Lsat_1_v5_gn_4_82740 10.0kb upstream 10.0kb upstream 10988   true Lsat_1_v8_lg_4: 130868610-130879597 Lactuca sativa
Lsat_1_v5_gn_4_82740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 130868610-130878609 Lactuca sativa
Lsat_1_v5_gn_4_82740 10.0kb downstream 10.0kb downstream 10988   true Lsat_1_v8_lg_4: 130878610-130889597 Lactuca sativa
Lsat_1_v5_gn_4_82740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 130879598-130889597 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466673 5263 Asterids View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain