Gene : Lsat_1_v5_gn_4_86221 L. sativa V8
Defline:  (1 of 59) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  2530
Name:  ? Lsat_1_v5_gn_4_86221 Secondary Identifier:  ? PAC:38930968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_86221 0.5kb upstream 0.5kb upstream 2359   true Lsat_1_v8_lg_4: 140877531-140879889 Lactuca sativa
Lsat_1_v5_gn_4_86221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 140879390-140879889 Lactuca sativa
Lsat_1_v5_gn_4_86221 0.5kb downstream 0.5kb downstream 2359   true Lsat_1_v8_lg_4: 140877031-140879389 Lactuca sativa
Lsat_1_v5_gn_4_86221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 140877031-140877530 Lactuca sativa
Lsat_1_v5_gn_4_86221 1.0kb upstream 1.0kb upstream 2859   true Lsat_1_v8_lg_4: 140877531-140880389 Lactuca sativa
Lsat_1_v5_gn_4_86221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 140879390-140880389 Lactuca sativa
Lsat_1_v5_gn_4_86221 1.0kb downstream 1.0kb downstream 2859   true Lsat_1_v8_lg_4: 140876531-140879389 Lactuca sativa
Lsat_1_v5_gn_4_86221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 140876531-140877530 Lactuca sativa
Lsat_1_v5_gn_4_86221 2.0kb upstream 2.0kb upstream 3859   true Lsat_1_v8_lg_4: 140877531-140881389 Lactuca sativa
Lsat_1_v5_gn_4_86221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 140879390-140881389 Lactuca sativa
Lsat_1_v5_gn_4_86221 2.0kb downstream 2.0kb downstream 3859   true Lsat_1_v8_lg_4: 140875531-140879389 Lactuca sativa
Lsat_1_v5_gn_4_86221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 140875531-140877530 Lactuca sativa
Lsat_1_v5_gn_4_86221 5.0kb upstream 5.0kb upstream 6859   true Lsat_1_v8_lg_4: 140877531-140884389 Lactuca sativa
Lsat_1_v5_gn_4_86221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 140879390-140884389 Lactuca sativa
Lsat_1_v5_gn_4_86221 5.0kb downstream 5.0kb downstream 6859   true Lsat_1_v8_lg_4: 140872531-140879389 Lactuca sativa
Lsat_1_v5_gn_4_86221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 140872531-140877530 Lactuca sativa
Lsat_1_v5_gn_4_86221 10.0kb upstream 10.0kb upstream 11859   true Lsat_1_v8_lg_4: 140877531-140889389 Lactuca sativa
Lsat_1_v5_gn_4_86221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 140879390-140889389 Lactuca sativa
Lsat_1_v5_gn_4_86221 10.0kb downstream 10.0kb downstream 11859   true Lsat_1_v8_lg_4: 140867531-140879389 Lactuca sativa
Lsat_1_v5_gn_4_86221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 140867531-140877530 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477756 5263 Asterids View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain