Gene : Lsat_1_v5_gn_4_86161 L. sativa V8
Defline:  (1 of 59) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  2529
Name:  ? Lsat_1_v5_gn_4_86161 Secondary Identifier:  ? PAC:38928191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_86161 0.5kb upstream 0.5kb upstream 2222   true Lsat_1_v8_lg_4: 140768401-140770622 Lactuca sativa
Lsat_1_v5_gn_4_86161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 140770123-140770622 Lactuca sativa
Lsat_1_v5_gn_4_86161 0.5kb downstream 0.5kb downstream 2222   true Lsat_1_v8_lg_4: 140767901-140770122 Lactuca sativa
Lsat_1_v5_gn_4_86161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 140767901-140768400 Lactuca sativa
Lsat_1_v5_gn_4_86161 1.0kb upstream 1.0kb upstream 2722   true Lsat_1_v8_lg_4: 140768401-140771122 Lactuca sativa
Lsat_1_v5_gn_4_86161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 140770123-140771122 Lactuca sativa
Lsat_1_v5_gn_4_86161 1.0kb downstream 1.0kb downstream 2722   true Lsat_1_v8_lg_4: 140767401-140770122 Lactuca sativa
Lsat_1_v5_gn_4_86161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 140767401-140768400 Lactuca sativa
Lsat_1_v5_gn_4_86161 2.0kb upstream 2.0kb upstream 3722   true Lsat_1_v8_lg_4: 140768401-140772122 Lactuca sativa
Lsat_1_v5_gn_4_86161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 140770123-140772122 Lactuca sativa
Lsat_1_v5_gn_4_86161 2.0kb downstream 2.0kb downstream 3722   true Lsat_1_v8_lg_4: 140766401-140770122 Lactuca sativa
Lsat_1_v5_gn_4_86161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 140766401-140768400 Lactuca sativa
Lsat_1_v5_gn_4_86161 5.0kb upstream 5.0kb upstream 6722   true Lsat_1_v8_lg_4: 140768401-140775122 Lactuca sativa
Lsat_1_v5_gn_4_86161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 140770123-140775122 Lactuca sativa
Lsat_1_v5_gn_4_86161 5.0kb downstream 5.0kb downstream 6722   true Lsat_1_v8_lg_4: 140763401-140770122 Lactuca sativa
Lsat_1_v5_gn_4_86161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 140763401-140768400 Lactuca sativa
Lsat_1_v5_gn_4_86161 10.0kb upstream 10.0kb upstream 11722   true Lsat_1_v8_lg_4: 140768401-140780122 Lactuca sativa
Lsat_1_v5_gn_4_86161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 140770123-140780122 Lactuca sativa
Lsat_1_v5_gn_4_86161 10.0kb downstream 10.0kb downstream 11722   true Lsat_1_v8_lg_4: 140758401-140770122 Lactuca sativa
Lsat_1_v5_gn_4_86161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 140758401-140768400 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477756 5263 Asterids View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain