Gene : Lsat_1_v5_gn_4_85120 L. sativa V8
Defline:  (1 of 1) PF00153//PF13202//PF13499//PF13833 - Mitochondrial carrier protein (Mito_carr) // EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7) // EF-hand domain pair (EF-hand_8) Genomic Order:  2459
Name:  ? Lsat_1_v5_gn_4_85120 Secondary Identifier:  ? PAC:38928315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_85120 0.5kb upstream 0.5kb upstream 3074   true Lsat_1_v8_lg_4: 136578699-136581772 Lactuca sativa
Lsat_1_v5_gn_4_85120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 136578699-136579198 Lactuca sativa
Lsat_1_v5_gn_4_85120 0.5kb downstream 0.5kb downstream 3074   true Lsat_1_v8_lg_4: 136579199-136582272 Lactuca sativa
Lsat_1_v5_gn_4_85120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 136581773-136582272 Lactuca sativa
Lsat_1_v5_gn_4_85120 1.0kb upstream 1.0kb upstream 3574   true Lsat_1_v8_lg_4: 136578199-136581772 Lactuca sativa
Lsat_1_v5_gn_4_85120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 136578199-136579198 Lactuca sativa
Lsat_1_v5_gn_4_85120 1.0kb downstream 1.0kb downstream 3574   true Lsat_1_v8_lg_4: 136579199-136582772 Lactuca sativa
Lsat_1_v5_gn_4_85120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 136581773-136582772 Lactuca sativa
Lsat_1_v5_gn_4_85120 2.0kb upstream 2.0kb upstream 4574   true Lsat_1_v8_lg_4: 136577199-136581772 Lactuca sativa
Lsat_1_v5_gn_4_85120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 136577199-136579198 Lactuca sativa
Lsat_1_v5_gn_4_85120 2.0kb downstream 2.0kb downstream 4574   true Lsat_1_v8_lg_4: 136579199-136583772 Lactuca sativa
Lsat_1_v5_gn_4_85120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 136581773-136583772 Lactuca sativa
Lsat_1_v5_gn_4_85120 5.0kb upstream 5.0kb upstream 7574   true Lsat_1_v8_lg_4: 136574199-136581772 Lactuca sativa
Lsat_1_v5_gn_4_85120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 136574199-136579198 Lactuca sativa
Lsat_1_v5_gn_4_85120 5.0kb downstream 5.0kb downstream 7574   true Lsat_1_v8_lg_4: 136579199-136586772 Lactuca sativa
Lsat_1_v5_gn_4_85120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 136581773-136586772 Lactuca sativa
Lsat_1_v5_gn_4_85120 10.0kb upstream 10.0kb upstream 12574   true Lsat_1_v8_lg_4: 136569199-136581772 Lactuca sativa
Lsat_1_v5_gn_4_85120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 136569199-136579198 Lactuca sativa
Lsat_1_v5_gn_4_85120 10.0kb downstream 10.0kb downstream 12574   true Lsat_1_v8_lg_4: 136579199-136591772 Lactuca sativa
Lsat_1_v5_gn_4_85120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 136581773-136591772 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478213 5263 Asterids View MSA
123740149 5271 Pentapetalae View MSA
122790227 5272 Eudicot View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain