Gene : Lsat_1_v5_gn_4_84960 L. sativa V8
Defline:  (1 of 1) PTHR16517//PTHR16517:SF27 - TUBBY-RELATED // TUBBY-LIKE PROTEIN 8 Genomic Order:  2482
Name:  ? Lsat_1_v5_gn_4_84960 Secondary Identifier:  ? PAC:38929243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_84960 0.5kb upstream 0.5kb upstream 3113   true Lsat_1_v8_lg_4: 137575550-137578662 Lactuca sativa
Lsat_1_v5_gn_4_84960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 137575550-137576049 Lactuca sativa
Lsat_1_v5_gn_4_84960 0.5kb downstream 0.5kb downstream 3113   true Lsat_1_v8_lg_4: 137576050-137579162 Lactuca sativa
Lsat_1_v5_gn_4_84960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 137578663-137579162 Lactuca sativa
Lsat_1_v5_gn_4_84960 1.0kb upstream 1.0kb upstream 3613   true Lsat_1_v8_lg_4: 137575050-137578662 Lactuca sativa
Lsat_1_v5_gn_4_84960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 137575050-137576049 Lactuca sativa
Lsat_1_v5_gn_4_84960 1.0kb downstream 1.0kb downstream 3613   true Lsat_1_v8_lg_4: 137576050-137579662 Lactuca sativa
Lsat_1_v5_gn_4_84960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 137578663-137579662 Lactuca sativa
Lsat_1_v5_gn_4_84960 2.0kb upstream 2.0kb upstream 4613   true Lsat_1_v8_lg_4: 137574050-137578662 Lactuca sativa
Lsat_1_v5_gn_4_84960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 137574050-137576049 Lactuca sativa
Lsat_1_v5_gn_4_84960 2.0kb downstream 2.0kb downstream 4613   true Lsat_1_v8_lg_4: 137576050-137580662 Lactuca sativa
Lsat_1_v5_gn_4_84960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 137578663-137580662 Lactuca sativa
Lsat_1_v5_gn_4_84960 5.0kb upstream 5.0kb upstream 7613   true Lsat_1_v8_lg_4: 137571050-137578662 Lactuca sativa
Lsat_1_v5_gn_4_84960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 137571050-137576049 Lactuca sativa
Lsat_1_v5_gn_4_84960 5.0kb downstream 5.0kb downstream 7613   true Lsat_1_v8_lg_4: 137576050-137583662 Lactuca sativa
Lsat_1_v5_gn_4_84960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 137578663-137583662 Lactuca sativa
Lsat_1_v5_gn_4_84960 10.0kb upstream 10.0kb upstream 12613   true Lsat_1_v8_lg_4: 137566050-137578662 Lactuca sativa
Lsat_1_v5_gn_4_84960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 137566050-137576049 Lactuca sativa
Lsat_1_v5_gn_4_84960 10.0kb downstream 10.0kb downstream 12613   true Lsat_1_v8_lg_4: 137576050-137588662 Lactuca sativa
Lsat_1_v5_gn_4_84960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 137578663-137588662 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473938 5263 Asterids View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain