Gene : Lsat_1_v5_gn_4_87520 L. sativa V8
Defline:  (1 of 1) K10903 - HUS1 checkpoint protein (HUS1) Genomic Order:  2553
Name:  ? Lsat_1_v5_gn_4_87520 Secondary Identifier:  ? PAC:38934119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_87520 0.5kb upstream 0.5kb upstream 1737   true Lsat_1_v8_lg_4: 142767558-142769294 Lactuca sativa
Lsat_1_v5_gn_4_87520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 142767558-142768057 Lactuca sativa
Lsat_1_v5_gn_4_87520 0.5kb downstream 0.5kb downstream 1737   true Lsat_1_v8_lg_4: 142768058-142769794 Lactuca sativa
Lsat_1_v5_gn_4_87520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 142769295-142769794 Lactuca sativa
Lsat_1_v5_gn_4_87520 1.0kb upstream 1.0kb upstream 2237   true Lsat_1_v8_lg_4: 142767058-142769294 Lactuca sativa
Lsat_1_v5_gn_4_87520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 142767058-142768057 Lactuca sativa
Lsat_1_v5_gn_4_87520 1.0kb downstream 1.0kb downstream 2237   true Lsat_1_v8_lg_4: 142768058-142770294 Lactuca sativa
Lsat_1_v5_gn_4_87520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 142769295-142770294 Lactuca sativa
Lsat_1_v5_gn_4_87520 2.0kb upstream 2.0kb upstream 3237   true Lsat_1_v8_lg_4: 142766058-142769294 Lactuca sativa
Lsat_1_v5_gn_4_87520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 142766058-142768057 Lactuca sativa
Lsat_1_v5_gn_4_87520 2.0kb downstream 2.0kb downstream 3237   true Lsat_1_v8_lg_4: 142768058-142771294 Lactuca sativa
Lsat_1_v5_gn_4_87520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 142769295-142771294 Lactuca sativa
Lsat_1_v5_gn_4_87520 5.0kb upstream 5.0kb upstream 6237   true Lsat_1_v8_lg_4: 142763058-142769294 Lactuca sativa
Lsat_1_v5_gn_4_87520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 142763058-142768057 Lactuca sativa
Lsat_1_v5_gn_4_87520 5.0kb downstream 5.0kb downstream 6237   true Lsat_1_v8_lg_4: 142768058-142774294 Lactuca sativa
Lsat_1_v5_gn_4_87520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 142769295-142774294 Lactuca sativa
Lsat_1_v5_gn_4_87520 10.0kb upstream 10.0kb upstream 11237   true Lsat_1_v8_lg_4: 142758058-142769294 Lactuca sativa
Lsat_1_v5_gn_4_87520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 142758058-142768057 Lactuca sativa
Lsat_1_v5_gn_4_87520 10.0kb downstream 10.0kb downstream 11237   true Lsat_1_v8_lg_4: 142768058-142779294 Lactuca sativa
Lsat_1_v5_gn_4_87520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 142769295-142779294 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468668 5263 Asterids View MSA
123737644 5271 Pentapetalae View MSA
122786635 5272 Eudicot View MSA
122044274 5273 Angiosperm View MSA
121346452 5274 Embryophyte View MSA
123425931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain