Gene : Lsat_1_v5_gn_4_88581 L. sativa V8
Defline:  (1 of 3) PTHR31288//PTHR31288:SF5 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  2591
Name:  ? Lsat_1_v5_gn_4_88581 Secondary Identifier:  ? PAC:38933059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_88581 0.5kb upstream 0.5kb upstream 3119   true Lsat_1_v8_lg_4: 145695487-145698605 Lactuca sativa
Lsat_1_v5_gn_4_88581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 145695487-145695986 Lactuca sativa
Lsat_1_v5_gn_4_88581 0.5kb downstream 0.5kb downstream 3119   true Lsat_1_v8_lg_4: 145695987-145699105 Lactuca sativa
Lsat_1_v5_gn_4_88581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 145698606-145699105 Lactuca sativa
Lsat_1_v5_gn_4_88581 1.0kb upstream 1.0kb upstream 3619   true Lsat_1_v8_lg_4: 145694987-145698605 Lactuca sativa
Lsat_1_v5_gn_4_88581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 145694987-145695986 Lactuca sativa
Lsat_1_v5_gn_4_88581 1.0kb downstream 1.0kb downstream 3619   true Lsat_1_v8_lg_4: 145695987-145699605 Lactuca sativa
Lsat_1_v5_gn_4_88581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 145698606-145699605 Lactuca sativa
Lsat_1_v5_gn_4_88581 2.0kb upstream 2.0kb upstream 4619   true Lsat_1_v8_lg_4: 145693987-145698605 Lactuca sativa
Lsat_1_v5_gn_4_88581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 145693987-145695986 Lactuca sativa
Lsat_1_v5_gn_4_88581 2.0kb downstream 2.0kb downstream 4619   true Lsat_1_v8_lg_4: 145695987-145700605 Lactuca sativa
Lsat_1_v5_gn_4_88581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 145698606-145700605 Lactuca sativa
Lsat_1_v5_gn_4_88581 5.0kb upstream 5.0kb upstream 7619   true Lsat_1_v8_lg_4: 145690987-145698605 Lactuca sativa
Lsat_1_v5_gn_4_88581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 145690987-145695986 Lactuca sativa
Lsat_1_v5_gn_4_88581 5.0kb downstream 5.0kb downstream 7619   true Lsat_1_v8_lg_4: 145695987-145703605 Lactuca sativa
Lsat_1_v5_gn_4_88581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 145698606-145703605 Lactuca sativa
Lsat_1_v5_gn_4_88581 10.0kb upstream 10.0kb upstream 12619   true Lsat_1_v8_lg_4: 145685987-145698605 Lactuca sativa
Lsat_1_v5_gn_4_88581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 145685987-145695986 Lactuca sativa
Lsat_1_v5_gn_4_88581 10.0kb downstream 10.0kb downstream 12619   true Lsat_1_v8_lg_4: 145695987-145708605 Lactuca sativa
Lsat_1_v5_gn_4_88581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 145698606-145708605 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
121473237 5263 Asterids View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain