Gene : Lsat_1_v5_gn_4_88480 L. sativa V8
Defline:  (1 of 2) K13153 - U11/U12 small nuclear ribonucleoprotein 25 kDa protein (SNRNP25) Genomic Order:  2561
Name:  ? Lsat_1_v5_gn_4_88480 Secondary Identifier:  ? PAC:38929030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_88480 0.5kb upstream 0.5kb upstream 2660   true Lsat_1_v8_lg_4: 143309052-143311711 Lactuca sativa
Lsat_1_v5_gn_4_88480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 143311212-143311711 Lactuca sativa
Lsat_1_v5_gn_4_88480 0.5kb downstream 0.5kb downstream 2660   true Lsat_1_v8_lg_4: 143308552-143311211 Lactuca sativa
Lsat_1_v5_gn_4_88480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 143308552-143309051 Lactuca sativa
Lsat_1_v5_gn_4_88480 1.0kb upstream 1.0kb upstream 3160   true Lsat_1_v8_lg_4: 143309052-143312211 Lactuca sativa
Lsat_1_v5_gn_4_88480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 143311212-143312211 Lactuca sativa
Lsat_1_v5_gn_4_88480 1.0kb downstream 1.0kb downstream 3160   true Lsat_1_v8_lg_4: 143308052-143311211 Lactuca sativa
Lsat_1_v5_gn_4_88480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 143308052-143309051 Lactuca sativa
Lsat_1_v5_gn_4_88480 2.0kb upstream 2.0kb upstream 4160   true Lsat_1_v8_lg_4: 143309052-143313211 Lactuca sativa
Lsat_1_v5_gn_4_88480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 143311212-143313211 Lactuca sativa
Lsat_1_v5_gn_4_88480 2.0kb downstream 2.0kb downstream 4160   true Lsat_1_v8_lg_4: 143307052-143311211 Lactuca sativa
Lsat_1_v5_gn_4_88480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 143307052-143309051 Lactuca sativa
Lsat_1_v5_gn_4_88480 5.0kb upstream 5.0kb upstream 7160   true Lsat_1_v8_lg_4: 143309052-143316211 Lactuca sativa
Lsat_1_v5_gn_4_88480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 143311212-143316211 Lactuca sativa
Lsat_1_v5_gn_4_88480 5.0kb downstream 5.0kb downstream 7160   true Lsat_1_v8_lg_4: 143304052-143311211 Lactuca sativa
Lsat_1_v5_gn_4_88480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 143304052-143309051 Lactuca sativa
Lsat_1_v5_gn_4_88480 10.0kb upstream 10.0kb upstream 12160   true Lsat_1_v8_lg_4: 143309052-143321211 Lactuca sativa
Lsat_1_v5_gn_4_88480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 143311212-143321211 Lactuca sativa
Lsat_1_v5_gn_4_88480 10.0kb downstream 10.0kb downstream 12160   true Lsat_1_v8_lg_4: 143299052-143311211 Lactuca sativa
Lsat_1_v5_gn_4_88480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 143299052-143309051 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477500 5263 Asterids View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain