Gene : Lsat_1_v5_gn_4_93560 L. sativa V8
Defline:  (1 of 2) PTHR11771//PTHR11771:SF38 - LIPOXYGENASE // LIPOXYGENASE 3, CHLOROPLASTIC-RELATED Genomic Order:  2707
Name:  ? Lsat_1_v5_gn_4_93560 Secondary Identifier:  ? PAC:38932109
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5409 Lactuca sativa pathologic  
Lsativa PWY-5410 Lactuca sativa pathologic  
Lsativa PWY-735 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_93560 0.5kb upstream 0.5kb upstream 4543   true Lsat_1_v8_lg_4: 152709713-152714255 Lactuca sativa
Lsat_1_v5_gn_4_93560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 152713756-152714255 Lactuca sativa
Lsat_1_v5_gn_4_93560 0.5kb downstream 0.5kb downstream 4543   true Lsat_1_v8_lg_4: 152709213-152713755 Lactuca sativa
Lsat_1_v5_gn_4_93560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 152709213-152709712 Lactuca sativa
Lsat_1_v5_gn_4_93560 1.0kb upstream 1.0kb upstream 5043   true Lsat_1_v8_lg_4: 152709713-152714755 Lactuca sativa
Lsat_1_v5_gn_4_93560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 152713756-152714755 Lactuca sativa
Lsat_1_v5_gn_4_93560 1.0kb downstream 1.0kb downstream 5043   true Lsat_1_v8_lg_4: 152708713-152713755 Lactuca sativa
Lsat_1_v5_gn_4_93560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 152708713-152709712 Lactuca sativa
Lsat_1_v5_gn_4_93560 2.0kb upstream 2.0kb upstream 6043   true Lsat_1_v8_lg_4: 152709713-152715755 Lactuca sativa
Lsat_1_v5_gn_4_93560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 152713756-152715755 Lactuca sativa
Lsat_1_v5_gn_4_93560 2.0kb downstream 2.0kb downstream 6043   true Lsat_1_v8_lg_4: 152707713-152713755 Lactuca sativa
Lsat_1_v5_gn_4_93560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 152707713-152709712 Lactuca sativa
Lsat_1_v5_gn_4_93560 5.0kb upstream 5.0kb upstream 9043   true Lsat_1_v8_lg_4: 152709713-152718755 Lactuca sativa
Lsat_1_v5_gn_4_93560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 152713756-152718755 Lactuca sativa
Lsat_1_v5_gn_4_93560 5.0kb downstream 5.0kb downstream 9043   true Lsat_1_v8_lg_4: 152704713-152713755 Lactuca sativa
Lsat_1_v5_gn_4_93560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 152704713-152709712 Lactuca sativa
Lsat_1_v5_gn_4_93560 10.0kb upstream 10.0kb upstream 14043   true Lsat_1_v8_lg_4: 152709713-152723755 Lactuca sativa
Lsat_1_v5_gn_4_93560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 152713756-152723755 Lactuca sativa
Lsat_1_v5_gn_4_93560 10.0kb downstream 10.0kb downstream 14043   true Lsat_1_v8_lg_4: 152699713-152713755 Lactuca sativa
Lsat_1_v5_gn_4_93560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 152699713-152709712 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470083 5263 Asterids View MSA
123743150 5271 Pentapetalae View MSA
122789243 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain