Gene : Lsat_1_v5_gn_5_13541 L. sativa V8
Defline:  (1 of 4) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED Genomic Order:  351
Name:  ? Lsat_1_v5_gn_5_13541 Secondary Identifier:  ? PAC:38969548
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7219 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_13541 0.5kb upstream 0.5kb upstream 2728   true Lsat_1_v8_lg_5: 25745613-25748340 Lactuca sativa
Lsat_1_v5_gn_5_13541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 25745613-25746112 Lactuca sativa
Lsat_1_v5_gn_5_13541 0.5kb downstream 0.5kb downstream 2728   true Lsat_1_v8_lg_5: 25746113-25748840 Lactuca sativa
Lsat_1_v5_gn_5_13541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 25748341-25748840 Lactuca sativa
Lsat_1_v5_gn_5_13541 1.0kb upstream 1.0kb upstream 3228   true Lsat_1_v8_lg_5: 25745113-25748340 Lactuca sativa
Lsat_1_v5_gn_5_13541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 25745113-25746112 Lactuca sativa
Lsat_1_v5_gn_5_13541 1.0kb downstream 1.0kb downstream 3228   true Lsat_1_v8_lg_5: 25746113-25749340 Lactuca sativa
Lsat_1_v5_gn_5_13541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 25748341-25749340 Lactuca sativa
Lsat_1_v5_gn_5_13541 2.0kb upstream 2.0kb upstream 4228   true Lsat_1_v8_lg_5: 25744113-25748340 Lactuca sativa
Lsat_1_v5_gn_5_13541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 25744113-25746112 Lactuca sativa
Lsat_1_v5_gn_5_13541 2.0kb downstream 2.0kb downstream 4228   true Lsat_1_v8_lg_5: 25746113-25750340 Lactuca sativa
Lsat_1_v5_gn_5_13541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 25748341-25750340 Lactuca sativa
Lsat_1_v5_gn_5_13541 5.0kb upstream 5.0kb upstream 7228   true Lsat_1_v8_lg_5: 25741113-25748340 Lactuca sativa
Lsat_1_v5_gn_5_13541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 25741113-25746112 Lactuca sativa
Lsat_1_v5_gn_5_13541 5.0kb downstream 5.0kb downstream 7228   true Lsat_1_v8_lg_5: 25746113-25753340 Lactuca sativa
Lsat_1_v5_gn_5_13541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 25748341-25753340 Lactuca sativa
Lsat_1_v5_gn_5_13541 10.0kb upstream 10.0kb upstream 12228   true Lsat_1_v8_lg_5: 25736113-25748340 Lactuca sativa
Lsat_1_v5_gn_5_13541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 25736113-25746112 Lactuca sativa
Lsat_1_v5_gn_5_13541 10.0kb downstream 10.0kb downstream 12228   true Lsat_1_v8_lg_5: 25746113-25758340 Lactuca sativa
Lsat_1_v5_gn_5_13541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 25748341-25758340 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
121478287 5263 Asterids View MSA
123746649 5271 Pentapetalae View MSA
122795443 5272 Eudicot View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain