Gene : Lsat_1_v5_gn_5_135681 L. sativa V8
Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  3627
Name:  ? Lsat_1_v5_gn_5_135681 Secondary Identifier:  ? PAC:38970839
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_135681 0.5kb upstream 0.5kb upstream 6566   true Lsat_1_v8_lg_5: 263887372-263893937 Lactuca sativa
Lsat_1_v5_gn_5_135681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 263893438-263893937 Lactuca sativa
Lsat_1_v5_gn_5_135681 0.5kb downstream 0.5kb downstream 6566   true Lsat_1_v8_lg_5: 263886872-263893437 Lactuca sativa
Lsat_1_v5_gn_5_135681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 263886872-263887371 Lactuca sativa
Lsat_1_v5_gn_5_135681 1.0kb upstream 1.0kb upstream 7066   true Lsat_1_v8_lg_5: 263887372-263894437 Lactuca sativa
Lsat_1_v5_gn_5_135681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 263893438-263894437 Lactuca sativa
Lsat_1_v5_gn_5_135681 1.0kb downstream 1.0kb downstream 7066   true Lsat_1_v8_lg_5: 263886372-263893437 Lactuca sativa
Lsat_1_v5_gn_5_135681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 263886372-263887371 Lactuca sativa
Lsat_1_v5_gn_5_135681 2.0kb upstream 2.0kb upstream 8066   true Lsat_1_v8_lg_5: 263887372-263895437 Lactuca sativa
Lsat_1_v5_gn_5_135681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 263893438-263895437 Lactuca sativa
Lsat_1_v5_gn_5_135681 2.0kb downstream 2.0kb downstream 8066   true Lsat_1_v8_lg_5: 263885372-263893437 Lactuca sativa
Lsat_1_v5_gn_5_135681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 263885372-263887371 Lactuca sativa
Lsat_1_v5_gn_5_135681 5.0kb upstream 5.0kb upstream 11066   true Lsat_1_v8_lg_5: 263887372-263898437 Lactuca sativa
Lsat_1_v5_gn_5_135681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 263893438-263898437 Lactuca sativa
Lsat_1_v5_gn_5_135681 5.0kb downstream 5.0kb downstream 11066   true Lsat_1_v8_lg_5: 263882372-263893437 Lactuca sativa
Lsat_1_v5_gn_5_135681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 263882372-263887371 Lactuca sativa
Lsat_1_v5_gn_5_135681 10.0kb upstream 10.0kb upstream 16066   true Lsat_1_v8_lg_5: 263887372-263903437 Lactuca sativa
Lsat_1_v5_gn_5_135681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 263893438-263903437 Lactuca sativa
Lsat_1_v5_gn_5_135681 10.0kb downstream 10.0kb downstream 16066   true Lsat_1_v8_lg_5: 263877372-263893437 Lactuca sativa
Lsat_1_v5_gn_5_135681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 263877372-263887371 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470674 5263 Asterids View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain