Gene : Lsat_1_v5_gn_5_135560 L. sativa V8
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3621
Name:  ? Lsat_1_v5_gn_5_135560 Secondary Identifier:  ? PAC:38968786
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5173 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PYRUVDEHYD-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_135560 0.5kb upstream 0.5kb upstream 5392   true Lsat_1_v8_lg_5: 263814212-263819603 Lactuca sativa
Lsat_1_v5_gn_5_135560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 263814212-263814711 Lactuca sativa
Lsat_1_v5_gn_5_135560 0.5kb downstream 0.5kb downstream 5392   true Lsat_1_v8_lg_5: 263814712-263820103 Lactuca sativa
Lsat_1_v5_gn_5_135560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 263819604-263820103 Lactuca sativa
Lsat_1_v5_gn_5_135560 1.0kb upstream 1.0kb upstream 5892   true Lsat_1_v8_lg_5: 263813712-263819603 Lactuca sativa
Lsat_1_v5_gn_5_135560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 263813712-263814711 Lactuca sativa
Lsat_1_v5_gn_5_135560 1.0kb downstream 1.0kb downstream 5892   true Lsat_1_v8_lg_5: 263814712-263820603 Lactuca sativa
Lsat_1_v5_gn_5_135560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 263819604-263820603 Lactuca sativa
Lsat_1_v5_gn_5_135560 2.0kb upstream 2.0kb upstream 6892   true Lsat_1_v8_lg_5: 263812712-263819603 Lactuca sativa
Lsat_1_v5_gn_5_135560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 263812712-263814711 Lactuca sativa
Lsat_1_v5_gn_5_135560 2.0kb downstream 2.0kb downstream 6892   true Lsat_1_v8_lg_5: 263814712-263821603 Lactuca sativa
Lsat_1_v5_gn_5_135560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 263819604-263821603 Lactuca sativa
Lsat_1_v5_gn_5_135560 5.0kb upstream 5.0kb upstream 9892   true Lsat_1_v8_lg_5: 263809712-263819603 Lactuca sativa
Lsat_1_v5_gn_5_135560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 263809712-263814711 Lactuca sativa
Lsat_1_v5_gn_5_135560 5.0kb downstream 5.0kb downstream 9892   true Lsat_1_v8_lg_5: 263814712-263824603 Lactuca sativa
Lsat_1_v5_gn_5_135560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 263819604-263824603 Lactuca sativa
Lsat_1_v5_gn_5_135560 10.0kb upstream 10.0kb upstream 14892   true Lsat_1_v8_lg_5: 263804712-263819603 Lactuca sativa
Lsat_1_v5_gn_5_135560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 263804712-263814711 Lactuca sativa
Lsat_1_v5_gn_5_135560 10.0kb downstream 10.0kb downstream 14892   true Lsat_1_v8_lg_5: 263814712-263829603 Lactuca sativa
Lsat_1_v5_gn_5_135560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 263819604-263829603 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471520 5263 Asterids View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain