Gene : Lsat_1_v5_gn_5_137241 L. sativa V8
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  3698
Name:  ? Lsat_1_v5_gn_5_137241 Secondary Identifier:  ? PAC:38968286
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2541 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_137241 0.5kb upstream 0.5kb upstream 3862   true Lsat_1_v8_lg_5: 266560006-266563867 Lactuca sativa
Lsat_1_v5_gn_5_137241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 266560006-266560505 Lactuca sativa
Lsat_1_v5_gn_5_137241 0.5kb downstream 0.5kb downstream 3862   true Lsat_1_v8_lg_5: 266560506-266564367 Lactuca sativa
Lsat_1_v5_gn_5_137241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 266563868-266564367 Lactuca sativa
Lsat_1_v5_gn_5_137241 1.0kb upstream 1.0kb upstream 4362   true Lsat_1_v8_lg_5: 266559506-266563867 Lactuca sativa
Lsat_1_v5_gn_5_137241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 266559506-266560505 Lactuca sativa
Lsat_1_v5_gn_5_137241 1.0kb downstream 1.0kb downstream 4362   true Lsat_1_v8_lg_5: 266560506-266564867 Lactuca sativa
Lsat_1_v5_gn_5_137241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 266563868-266564867 Lactuca sativa
Lsat_1_v5_gn_5_137241 2.0kb upstream 2.0kb upstream 5362   true Lsat_1_v8_lg_5: 266558506-266563867 Lactuca sativa
Lsat_1_v5_gn_5_137241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 266558506-266560505 Lactuca sativa
Lsat_1_v5_gn_5_137241 2.0kb downstream 2.0kb downstream 5362   true Lsat_1_v8_lg_5: 266560506-266565867 Lactuca sativa
Lsat_1_v5_gn_5_137241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 266563868-266565867 Lactuca sativa
Lsat_1_v5_gn_5_137241 5.0kb upstream 5.0kb upstream 8362   true Lsat_1_v8_lg_5: 266555506-266563867 Lactuca sativa
Lsat_1_v5_gn_5_137241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 266555506-266560505 Lactuca sativa
Lsat_1_v5_gn_5_137241 5.0kb downstream 5.0kb downstream 8362   true Lsat_1_v8_lg_5: 266560506-266568867 Lactuca sativa
Lsat_1_v5_gn_5_137241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 266563868-266568867 Lactuca sativa
Lsat_1_v5_gn_5_137241 10.0kb upstream 10.0kb upstream 13362   true Lsat_1_v8_lg_5: 266550506-266563867 Lactuca sativa
Lsat_1_v5_gn_5_137241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 266550506-266560505 Lactuca sativa
Lsat_1_v5_gn_5_137241 10.0kb downstream 10.0kb downstream 13362   true Lsat_1_v8_lg_5: 266560506-266573867 Lactuca sativa
Lsat_1_v5_gn_5_137241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 266563868-266573867 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476356 5263 Asterids View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain