Gene : Lsat_1_v5_gn_5_139981 L. sativa V8

Defline:  (1 of 54) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  3760
Name:  ? Lsat_1_v5_gn_5_139981 Secondary Identifier:  ? PAC:38965475

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_139981 0.5kb upstream 0.5kb upstream 3362   true Lsat_1_v8_lg_5: 269204442-269207803 Lactuca sativa
Lsat_1_v5_gn_5_139981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 269207304-269207803 Lactuca sativa
Lsat_1_v5_gn_5_139981 0.5kb downstream 0.5kb downstream 3362   true Lsat_1_v8_lg_5: 269203942-269207303 Lactuca sativa
Lsat_1_v5_gn_5_139981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 269203942-269204441 Lactuca sativa
Lsat_1_v5_gn_5_139981 1.0kb upstream 1.0kb upstream 3862   true Lsat_1_v8_lg_5: 269204442-269208303 Lactuca sativa
Lsat_1_v5_gn_5_139981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 269207304-269208303 Lactuca sativa
Lsat_1_v5_gn_5_139981 1.0kb downstream 1.0kb downstream 3862   true Lsat_1_v8_lg_5: 269203442-269207303 Lactuca sativa
Lsat_1_v5_gn_5_139981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 269203442-269204441 Lactuca sativa
Lsat_1_v5_gn_5_139981 2.0kb upstream 2.0kb upstream 4862   true Lsat_1_v8_lg_5: 269204442-269209303 Lactuca sativa
Lsat_1_v5_gn_5_139981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 269207304-269209303 Lactuca sativa
Lsat_1_v5_gn_5_139981 2.0kb downstream 2.0kb downstream 4862   true Lsat_1_v8_lg_5: 269202442-269207303 Lactuca sativa
Lsat_1_v5_gn_5_139981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 269202442-269204441 Lactuca sativa
Lsat_1_v5_gn_5_139981 5.0kb upstream 5.0kb upstream 7862   true Lsat_1_v8_lg_5: 269204442-269212303 Lactuca sativa
Lsat_1_v5_gn_5_139981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 269207304-269212303 Lactuca sativa
Lsat_1_v5_gn_5_139981 5.0kb downstream 5.0kb downstream 7862   true Lsat_1_v8_lg_5: 269199442-269207303 Lactuca sativa
Lsat_1_v5_gn_5_139981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 269199442-269204441 Lactuca sativa
Lsat_1_v5_gn_5_139981 10.0kb upstream 10.0kb upstream 12862   true Lsat_1_v8_lg_5: 269204442-269217303 Lactuca sativa
Lsat_1_v5_gn_5_139981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 269207304-269217303 Lactuca sativa
Lsat_1_v5_gn_5_139981 10.0kb downstream 10.0kb downstream 12862   true Lsat_1_v8_lg_5: 269194442-269207303 Lactuca sativa
Lsat_1_v5_gn_5_139981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 269194442-269204441 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478569 5263 Asterids View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain