Gene : Lsat_1_v5_gn_5_142520 L. sativa V8
Defline:  (1 of 2) PTHR13803//PTHR13803:SF4 - SEC24-RELATED PROTEIN // SEC24 Genomic Order:  3851
Name:  ? Lsat_1_v5_gn_5_142520 Secondary Identifier:  ? PAC:38964906
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_142520 0.5kb upstream 0.5kb upstream 8135   true Lsat_1_v8_lg_5: 273588222-273596356 Lactuca sativa
Lsat_1_v5_gn_5_142520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 273595857-273596356 Lactuca sativa
Lsat_1_v5_gn_5_142520 0.5kb downstream 0.5kb downstream 8135   true Lsat_1_v8_lg_5: 273587722-273595856 Lactuca sativa
Lsat_1_v5_gn_5_142520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 273587722-273588221 Lactuca sativa
Lsat_1_v5_gn_5_142520 1.0kb upstream 1.0kb upstream 8635   true Lsat_1_v8_lg_5: 273588222-273596856 Lactuca sativa
Lsat_1_v5_gn_5_142520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 273595857-273596856 Lactuca sativa
Lsat_1_v5_gn_5_142520 1.0kb downstream 1.0kb downstream 8635   true Lsat_1_v8_lg_5: 273587222-273595856 Lactuca sativa
Lsat_1_v5_gn_5_142520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 273587222-273588221 Lactuca sativa
Lsat_1_v5_gn_5_142520 2.0kb upstream 2.0kb upstream 9635   true Lsat_1_v8_lg_5: 273588222-273597856 Lactuca sativa
Lsat_1_v5_gn_5_142520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 273595857-273597856 Lactuca sativa
Lsat_1_v5_gn_5_142520 2.0kb downstream 2.0kb downstream 9635   true Lsat_1_v8_lg_5: 273586222-273595856 Lactuca sativa
Lsat_1_v5_gn_5_142520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 273586222-273588221 Lactuca sativa
Lsat_1_v5_gn_5_142520 5.0kb upstream 5.0kb upstream 12635   true Lsat_1_v8_lg_5: 273588222-273600856 Lactuca sativa
Lsat_1_v5_gn_5_142520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 273595857-273600856 Lactuca sativa
Lsat_1_v5_gn_5_142520 5.0kb downstream 5.0kb downstream 12635   true Lsat_1_v8_lg_5: 273583222-273595856 Lactuca sativa
Lsat_1_v5_gn_5_142520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 273583222-273588221 Lactuca sativa
Lsat_1_v5_gn_5_142520 10.0kb upstream 10.0kb upstream 17635   true Lsat_1_v8_lg_5: 273588222-273605856 Lactuca sativa
Lsat_1_v5_gn_5_142520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 273595857-273605856 Lactuca sativa
Lsat_1_v5_gn_5_142520 10.0kb downstream 10.0kb downstream 17635   true Lsat_1_v8_lg_5: 273578222-273595856 Lactuca sativa
Lsat_1_v5_gn_5_142520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 273578222-273588221 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481863 5263 Asterids View MSA
123737025 5271 Pentapetalae View MSA
122786743 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain