Gene : Lsat_1_v5_gn_5_143841 L. sativa V8
Defline:  (1 of 3) K07151 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase (STT3) Genomic Order:  3937
Name:  ? Lsat_1_v5_gn_5_143841 Secondary Identifier:  ? PAC:38966891
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_143841 0.5kb upstream 0.5kb upstream 6178   true Lsat_1_v8_lg_5: 277304084-277310261 Lactuca sativa
Lsat_1_v5_gn_5_143841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 277304084-277304583 Lactuca sativa
Lsat_1_v5_gn_5_143841 0.5kb downstream 0.5kb downstream 6178   true Lsat_1_v8_lg_5: 277304584-277310761 Lactuca sativa
Lsat_1_v5_gn_5_143841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 277310262-277310761 Lactuca sativa
Lsat_1_v5_gn_5_143841 1.0kb upstream 1.0kb upstream 6678   true Lsat_1_v8_lg_5: 277303584-277310261 Lactuca sativa
Lsat_1_v5_gn_5_143841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 277303584-277304583 Lactuca sativa
Lsat_1_v5_gn_5_143841 1.0kb downstream 1.0kb downstream 6678   true Lsat_1_v8_lg_5: 277304584-277311261 Lactuca sativa
Lsat_1_v5_gn_5_143841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 277310262-277311261 Lactuca sativa
Lsat_1_v5_gn_5_143841 2.0kb upstream 2.0kb upstream 7678   true Lsat_1_v8_lg_5: 277302584-277310261 Lactuca sativa
Lsat_1_v5_gn_5_143841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 277302584-277304583 Lactuca sativa
Lsat_1_v5_gn_5_143841 2.0kb downstream 2.0kb downstream 7678   true Lsat_1_v8_lg_5: 277304584-277312261 Lactuca sativa
Lsat_1_v5_gn_5_143841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 277310262-277312261 Lactuca sativa
Lsat_1_v5_gn_5_143841 5.0kb upstream 5.0kb upstream 10678   true Lsat_1_v8_lg_5: 277299584-277310261 Lactuca sativa
Lsat_1_v5_gn_5_143841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 277299584-277304583 Lactuca sativa
Lsat_1_v5_gn_5_143841 5.0kb downstream 5.0kb downstream 10678   true Lsat_1_v8_lg_5: 277304584-277315261 Lactuca sativa
Lsat_1_v5_gn_5_143841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 277310262-277315261 Lactuca sativa
Lsat_1_v5_gn_5_143841 10.0kb upstream 10.0kb upstream 15678   true Lsat_1_v8_lg_5: 277294584-277310261 Lactuca sativa
Lsat_1_v5_gn_5_143841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 277294584-277304583 Lactuca sativa
Lsat_1_v5_gn_5_143841 10.0kb downstream 10.0kb downstream 15678   true Lsat_1_v8_lg_5: 277304584-277320261 Lactuca sativa
Lsat_1_v5_gn_5_143841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 277310262-277320261 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
121472417 5263 Asterids View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain