Gene : Lsat_1_v5_gn_5_143721 L. sativa V8
Defline:  (1 of 1) PTHR11062//PTHR11062:SF84 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  3940
Name:  ? Lsat_1_v5_gn_5_143721 Secondary Identifier:  ? PAC:38968100
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5980 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_143721 0.5kb upstream 0.5kb upstream 3521   true Lsat_1_v8_lg_5: 278793880-278797400 Lactuca sativa
Lsat_1_v5_gn_5_143721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 278796901-278797400 Lactuca sativa
Lsat_1_v5_gn_5_143721 0.5kb downstream 0.5kb downstream 3521   true Lsat_1_v8_lg_5: 278793380-278796900 Lactuca sativa
Lsat_1_v5_gn_5_143721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 278793380-278793879 Lactuca sativa
Lsat_1_v5_gn_5_143721 1.0kb upstream 1.0kb upstream 4021   true Lsat_1_v8_lg_5: 278793880-278797900 Lactuca sativa
Lsat_1_v5_gn_5_143721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 278796901-278797900 Lactuca sativa
Lsat_1_v5_gn_5_143721 1.0kb downstream 1.0kb downstream 4021   true Lsat_1_v8_lg_5: 278792880-278796900 Lactuca sativa
Lsat_1_v5_gn_5_143721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 278792880-278793879 Lactuca sativa
Lsat_1_v5_gn_5_143721 2.0kb upstream 2.0kb upstream 5021   true Lsat_1_v8_lg_5: 278793880-278798900 Lactuca sativa
Lsat_1_v5_gn_5_143721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 278796901-278798900 Lactuca sativa
Lsat_1_v5_gn_5_143721 2.0kb downstream 2.0kb downstream 5021   true Lsat_1_v8_lg_5: 278791880-278796900 Lactuca sativa
Lsat_1_v5_gn_5_143721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 278791880-278793879 Lactuca sativa
Lsat_1_v5_gn_5_143721 5.0kb upstream 5.0kb upstream 8021   true Lsat_1_v8_lg_5: 278793880-278801900 Lactuca sativa
Lsat_1_v5_gn_5_143721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 278796901-278801900 Lactuca sativa
Lsat_1_v5_gn_5_143721 5.0kb downstream 5.0kb downstream 8021   true Lsat_1_v8_lg_5: 278788880-278796900 Lactuca sativa
Lsat_1_v5_gn_5_143721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 278788880-278793879 Lactuca sativa
Lsat_1_v5_gn_5_143721 10.0kb upstream 10.0kb upstream 13021   true Lsat_1_v8_lg_5: 278793880-278806900 Lactuca sativa
Lsat_1_v5_gn_5_143721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 278796901-278806900 Lactuca sativa
Lsat_1_v5_gn_5_143721 10.0kb downstream 10.0kb downstream 13021   true Lsat_1_v8_lg_5: 278783880-278796900 Lactuca sativa
Lsat_1_v5_gn_5_143721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 278783880-278793879 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473397 5263 Asterids View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain