Gene : Lsat_1_v5_gn_5_148821 L. sativa V8
Defline:  (1 of 1) PTHR11771//PTHR11771:SF53 - LIPOXYGENASE // LINOLEATE 9S-LIPOXYGENASE 5, CHLOROPLASTIC Genomic Order:  3998
Name:  ? Lsat_1_v5_gn_5_148821 Secondary Identifier:  ? PAC:38967266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_148821 0.5kb upstream 0.5kb upstream 8147   true Lsat_1_v8_lg_5: 281993827-282001973 Lactuca sativa
Lsat_1_v5_gn_5_148821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 281993827-281994326 Lactuca sativa
Lsat_1_v5_gn_5_148821 0.5kb downstream 0.5kb downstream 8147   true Lsat_1_v8_lg_5: 281994327-282002473 Lactuca sativa
Lsat_1_v5_gn_5_148821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 282001974-282002473 Lactuca sativa
Lsat_1_v5_gn_5_148821 1.0kb upstream 1.0kb upstream 8647   true Lsat_1_v8_lg_5: 281993327-282001973 Lactuca sativa
Lsat_1_v5_gn_5_148821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 281993327-281994326 Lactuca sativa
Lsat_1_v5_gn_5_148821 1.0kb downstream 1.0kb downstream 8647   true Lsat_1_v8_lg_5: 281994327-282002973 Lactuca sativa
Lsat_1_v5_gn_5_148821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 282001974-282002973 Lactuca sativa
Lsat_1_v5_gn_5_148821 2.0kb upstream 2.0kb upstream 9647   true Lsat_1_v8_lg_5: 281992327-282001973 Lactuca sativa
Lsat_1_v5_gn_5_148821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 281992327-281994326 Lactuca sativa
Lsat_1_v5_gn_5_148821 2.0kb downstream 2.0kb downstream 9647   true Lsat_1_v8_lg_5: 281994327-282003973 Lactuca sativa
Lsat_1_v5_gn_5_148821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 282001974-282003973 Lactuca sativa
Lsat_1_v5_gn_5_148821 5.0kb upstream 5.0kb upstream 12647   true Lsat_1_v8_lg_5: 281989327-282001973 Lactuca sativa
Lsat_1_v5_gn_5_148821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 281989327-281994326 Lactuca sativa
Lsat_1_v5_gn_5_148821 5.0kb downstream 5.0kb downstream 12647   true Lsat_1_v8_lg_5: 281994327-282006973 Lactuca sativa
Lsat_1_v5_gn_5_148821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 282001974-282006973 Lactuca sativa
Lsat_1_v5_gn_5_148821 10.0kb upstream 10.0kb upstream 17647   true Lsat_1_v8_lg_5: 281984327-282001973 Lactuca sativa
Lsat_1_v5_gn_5_148821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 281984327-281994326 Lactuca sativa
Lsat_1_v5_gn_5_148821 10.0kb downstream 10.0kb downstream 17647   true Lsat_1_v8_lg_5: 281994327-282011973 Lactuca sativa
Lsat_1_v5_gn_5_148821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 282001974-282011973 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
121473028 5263 Asterids View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain