Gene : Lsat_1_v5_gn_5_148780 L. sativa V8
Defline:  (1 of 2) 2.5.1.79 - Thermospermine synthase Genomic Order:  4000
Name:  ? Lsat_1_v5_gn_5_148780 Secondary Identifier:  ? PAC:38968831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_148780 0.5kb upstream 0.5kb upstream 2974   true Lsat_1_v8_lg_5: 282028455-282031428 Lactuca sativa
Lsat_1_v5_gn_5_148780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 282030929-282031428 Lactuca sativa
Lsat_1_v5_gn_5_148780 0.5kb downstream 0.5kb downstream 2974   true Lsat_1_v8_lg_5: 282027955-282030928 Lactuca sativa
Lsat_1_v5_gn_5_148780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 282027955-282028454 Lactuca sativa
Lsat_1_v5_gn_5_148780 1.0kb upstream 1.0kb upstream 3474   true Lsat_1_v8_lg_5: 282028455-282031928 Lactuca sativa
Lsat_1_v5_gn_5_148780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 282030929-282031928 Lactuca sativa
Lsat_1_v5_gn_5_148780 1.0kb downstream 1.0kb downstream 3474   true Lsat_1_v8_lg_5: 282027455-282030928 Lactuca sativa
Lsat_1_v5_gn_5_148780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 282027455-282028454 Lactuca sativa
Lsat_1_v5_gn_5_148780 2.0kb upstream 2.0kb upstream 4474   true Lsat_1_v8_lg_5: 282028455-282032928 Lactuca sativa
Lsat_1_v5_gn_5_148780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 282030929-282032928 Lactuca sativa
Lsat_1_v5_gn_5_148780 2.0kb downstream 2.0kb downstream 4474   true Lsat_1_v8_lg_5: 282026455-282030928 Lactuca sativa
Lsat_1_v5_gn_5_148780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 282026455-282028454 Lactuca sativa
Lsat_1_v5_gn_5_148780 5.0kb upstream 5.0kb upstream 7474   true Lsat_1_v8_lg_5: 282028455-282035928 Lactuca sativa
Lsat_1_v5_gn_5_148780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 282030929-282035928 Lactuca sativa
Lsat_1_v5_gn_5_148780 5.0kb downstream 5.0kb downstream 7474   true Lsat_1_v8_lg_5: 282023455-282030928 Lactuca sativa
Lsat_1_v5_gn_5_148780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 282023455-282028454 Lactuca sativa
Lsat_1_v5_gn_5_148780 10.0kb upstream 10.0kb upstream 12474   true Lsat_1_v8_lg_5: 282028455-282040928 Lactuca sativa
Lsat_1_v5_gn_5_148780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 282030929-282040928 Lactuca sativa
Lsat_1_v5_gn_5_148780 10.0kb downstream 10.0kb downstream 12474   true Lsat_1_v8_lg_5: 282018455-282030928 Lactuca sativa
Lsat_1_v5_gn_5_148780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 282018455-282028454 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477561 5263 Asterids View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain