Gene : Lsat_1_v5_gn_5_149781 L. sativa V8
Defline:  (1 of 10) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  4057
Name:  ? Lsat_1_v5_gn_5_149781 Secondary Identifier:  ? PAC:38967358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_149781 0.5kb upstream 0.5kb upstream 1670   true Lsat_1_v8_lg_5: 284044325-284045994 Lactuca sativa
Lsat_1_v5_gn_5_149781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 284045495-284045994 Lactuca sativa
Lsat_1_v5_gn_5_149781 0.5kb downstream 0.5kb downstream 1670   true Lsat_1_v8_lg_5: 284043825-284045494 Lactuca sativa
Lsat_1_v5_gn_5_149781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 284043825-284044324 Lactuca sativa
Lsat_1_v5_gn_5_149781 1.0kb upstream 1.0kb upstream 2170   true Lsat_1_v8_lg_5: 284044325-284046494 Lactuca sativa
Lsat_1_v5_gn_5_149781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 284045495-284046494 Lactuca sativa
Lsat_1_v5_gn_5_149781 1.0kb downstream 1.0kb downstream 2170   true Lsat_1_v8_lg_5: 284043325-284045494 Lactuca sativa
Lsat_1_v5_gn_5_149781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 284043325-284044324 Lactuca sativa
Lsat_1_v5_gn_5_149781 2.0kb upstream 2.0kb upstream 3170   true Lsat_1_v8_lg_5: 284044325-284047494 Lactuca sativa
Lsat_1_v5_gn_5_149781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 284045495-284047494 Lactuca sativa
Lsat_1_v5_gn_5_149781 2.0kb downstream 2.0kb downstream 3170   true Lsat_1_v8_lg_5: 284042325-284045494 Lactuca sativa
Lsat_1_v5_gn_5_149781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 284042325-284044324 Lactuca sativa
Lsat_1_v5_gn_5_149781 5.0kb upstream 5.0kb upstream 6170   true Lsat_1_v8_lg_5: 284044325-284050494 Lactuca sativa
Lsat_1_v5_gn_5_149781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 284045495-284050494 Lactuca sativa
Lsat_1_v5_gn_5_149781 5.0kb downstream 5.0kb downstream 6170   true Lsat_1_v8_lg_5: 284039325-284045494 Lactuca sativa
Lsat_1_v5_gn_5_149781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 284039325-284044324 Lactuca sativa
Lsat_1_v5_gn_5_149781 10.0kb upstream 10.0kb upstream 11170   true Lsat_1_v8_lg_5: 284044325-284055494 Lactuca sativa
Lsat_1_v5_gn_5_149781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 284045495-284055494 Lactuca sativa
Lsat_1_v5_gn_5_149781 10.0kb downstream 10.0kb downstream 11170   true Lsat_1_v8_lg_5: 284034325-284045494 Lactuca sativa
Lsat_1_v5_gn_5_149781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 284034325-284044324 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469006 5263 Asterids View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain