Gene : Lsat_1_v5_gn_5_150361 L. sativa V8
Defline:  (1 of 79) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  4078
Name:  ? Lsat_1_v5_gn_5_150361 Secondary Identifier:  ? PAC:38965639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_150361 0.5kb upstream 0.5kb upstream 3155   true Lsat_1_v8_lg_5: 285070053-285073207 Lactuca sativa
Lsat_1_v5_gn_5_150361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 285070053-285070552 Lactuca sativa
Lsat_1_v5_gn_5_150361 0.5kb downstream 0.5kb downstream 3155   true Lsat_1_v8_lg_5: 285070553-285073707 Lactuca sativa
Lsat_1_v5_gn_5_150361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 285073208-285073707 Lactuca sativa
Lsat_1_v5_gn_5_150361 1.0kb upstream 1.0kb upstream 3655   true Lsat_1_v8_lg_5: 285069553-285073207 Lactuca sativa
Lsat_1_v5_gn_5_150361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 285069553-285070552 Lactuca sativa
Lsat_1_v5_gn_5_150361 1.0kb downstream 1.0kb downstream 3655   true Lsat_1_v8_lg_5: 285070553-285074207 Lactuca sativa
Lsat_1_v5_gn_5_150361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 285073208-285074207 Lactuca sativa
Lsat_1_v5_gn_5_150361 2.0kb upstream 2.0kb upstream 4655   true Lsat_1_v8_lg_5: 285068553-285073207 Lactuca sativa
Lsat_1_v5_gn_5_150361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 285068553-285070552 Lactuca sativa
Lsat_1_v5_gn_5_150361 2.0kb downstream 2.0kb downstream 4655   true Lsat_1_v8_lg_5: 285070553-285075207 Lactuca sativa
Lsat_1_v5_gn_5_150361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 285073208-285075207 Lactuca sativa
Lsat_1_v5_gn_5_150361 5.0kb upstream 5.0kb upstream 7655   true Lsat_1_v8_lg_5: 285065553-285073207 Lactuca sativa
Lsat_1_v5_gn_5_150361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 285065553-285070552 Lactuca sativa
Lsat_1_v5_gn_5_150361 5.0kb downstream 5.0kb downstream 7655   true Lsat_1_v8_lg_5: 285070553-285078207 Lactuca sativa
Lsat_1_v5_gn_5_150361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 285073208-285078207 Lactuca sativa
Lsat_1_v5_gn_5_150361 10.0kb upstream 10.0kb upstream 12655   true Lsat_1_v8_lg_5: 285060553-285073207 Lactuca sativa
Lsat_1_v5_gn_5_150361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 285060553-285070552 Lactuca sativa
Lsat_1_v5_gn_5_150361 10.0kb downstream 10.0kb downstream 12655   true Lsat_1_v8_lg_5: 285070553-285083207 Lactuca sativa
Lsat_1_v5_gn_5_150361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 285073208-285083207 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467509 5263 Asterids View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain