Gene : Lsat_1_v5_gn_5_149421 L. sativa V8
Defline:  (1 of 7) PTHR23334//PTHR23334:SF25 - CCAAT/ENHANCER BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4038
Name:  ? Lsat_1_v5_gn_5_149421 Secondary Identifier:  ? PAC:38967557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_149421 0.5kb upstream 0.5kb upstream 1354   true Lsat_1_v8_lg_5: 283513814-283515167 Lactuca sativa
Lsat_1_v5_gn_5_149421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 283514668-283515167 Lactuca sativa
Lsat_1_v5_gn_5_149421 0.5kb downstream 0.5kb downstream 1354   true Lsat_1_v8_lg_5: 283513314-283514667 Lactuca sativa
Lsat_1_v5_gn_5_149421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 283513314-283513813 Lactuca sativa
Lsat_1_v5_gn_5_149421 1.0kb upstream 1.0kb upstream 1854   true Lsat_1_v8_lg_5: 283513814-283515667 Lactuca sativa
Lsat_1_v5_gn_5_149421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 283514668-283515667 Lactuca sativa
Lsat_1_v5_gn_5_149421 1.0kb downstream 1.0kb downstream 1854   true Lsat_1_v8_lg_5: 283512814-283514667 Lactuca sativa
Lsat_1_v5_gn_5_149421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 283512814-283513813 Lactuca sativa
Lsat_1_v5_gn_5_149421 2.0kb upstream 2.0kb upstream 2854   true Lsat_1_v8_lg_5: 283513814-283516667 Lactuca sativa
Lsat_1_v5_gn_5_149421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 283514668-283516667 Lactuca sativa
Lsat_1_v5_gn_5_149421 2.0kb downstream 2.0kb downstream 2854   true Lsat_1_v8_lg_5: 283511814-283514667 Lactuca sativa
Lsat_1_v5_gn_5_149421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 283511814-283513813 Lactuca sativa
Lsat_1_v5_gn_5_149421 5.0kb upstream 5.0kb upstream 5854   true Lsat_1_v8_lg_5: 283513814-283519667 Lactuca sativa
Lsat_1_v5_gn_5_149421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 283514668-283519667 Lactuca sativa
Lsat_1_v5_gn_5_149421 5.0kb downstream 5.0kb downstream 5854   true Lsat_1_v8_lg_5: 283508814-283514667 Lactuca sativa
Lsat_1_v5_gn_5_149421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 283508814-283513813 Lactuca sativa
Lsat_1_v5_gn_5_149421 10.0kb upstream 10.0kb upstream 10854   true Lsat_1_v8_lg_5: 283513814-283524667 Lactuca sativa
Lsat_1_v5_gn_5_149421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 283514668-283524667 Lactuca sativa
Lsat_1_v5_gn_5_149421 10.0kb downstream 10.0kb downstream 10854   true Lsat_1_v8_lg_5: 283503814-283514667 Lactuca sativa
Lsat_1_v5_gn_5_149421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 283503814-283513813 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453426 5263 Asterids View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain