Gene : Lsat_1_v5_gn_5_112780 L. sativa V8
Defline:  (1 of 2) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3060
Name:  ? Lsat_1_v5_gn_5_112780 Secondary Identifier:  ? PAC:38968482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_112780 0.5kb upstream 0.5kb upstream 1289   true Lsat_1_v8_lg_5: 237930450-237931738 Lactuca sativa
Lsat_1_v5_gn_5_112780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 237930450-237930949 Lactuca sativa
Lsat_1_v5_gn_5_112780 0.5kb downstream 0.5kb downstream 1289   true Lsat_1_v8_lg_5: 237930950-237932238 Lactuca sativa
Lsat_1_v5_gn_5_112780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 237931739-237932238 Lactuca sativa
Lsat_1_v5_gn_5_112780 1.0kb upstream 1.0kb upstream 1789   true Lsat_1_v8_lg_5: 237929950-237931738 Lactuca sativa
Lsat_1_v5_gn_5_112780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 237929950-237930949 Lactuca sativa
Lsat_1_v5_gn_5_112780 1.0kb downstream 1.0kb downstream 1789   true Lsat_1_v8_lg_5: 237930950-237932738 Lactuca sativa
Lsat_1_v5_gn_5_112780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 237931739-237932738 Lactuca sativa
Lsat_1_v5_gn_5_112780 2.0kb upstream 2.0kb upstream 2789   true Lsat_1_v8_lg_5: 237928950-237931738 Lactuca sativa
Lsat_1_v5_gn_5_112780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 237928950-237930949 Lactuca sativa
Lsat_1_v5_gn_5_112780 2.0kb downstream 2.0kb downstream 2789   true Lsat_1_v8_lg_5: 237930950-237933738 Lactuca sativa
Lsat_1_v5_gn_5_112780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 237931739-237933738 Lactuca sativa
Lsat_1_v5_gn_5_112780 5.0kb upstream 5.0kb upstream 5789   true Lsat_1_v8_lg_5: 237925950-237931738 Lactuca sativa
Lsat_1_v5_gn_5_112780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 237925950-237930949 Lactuca sativa
Lsat_1_v5_gn_5_112780 5.0kb downstream 5.0kb downstream 5789   true Lsat_1_v8_lg_5: 237930950-237936738 Lactuca sativa
Lsat_1_v5_gn_5_112780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 237931739-237936738 Lactuca sativa
Lsat_1_v5_gn_5_112780 10.0kb upstream 10.0kb upstream 10789   true Lsat_1_v8_lg_5: 237920950-237931738 Lactuca sativa
Lsat_1_v5_gn_5_112780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 237920950-237930949 Lactuca sativa
Lsat_1_v5_gn_5_112780 10.0kb downstream 10.0kb downstream 10789   true Lsat_1_v8_lg_5: 237930950-237941738 Lactuca sativa
Lsat_1_v5_gn_5_112780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 237931739-237941738 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467749 5263 Asterids View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain