Gene : Lsat_1_v5_gn_5_112921 L. sativa V8
Defline:  (1 of 2) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  3065
Name:  ? Lsat_1_v5_gn_5_112921 Secondary Identifier:  ? PAC:38964980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_112921 0.5kb upstream 0.5kb upstream 2034   true Lsat_1_v8_lg_5: 238166509-238168542 Lactuca sativa
Lsat_1_v5_gn_5_112921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 238168043-238168542 Lactuca sativa
Lsat_1_v5_gn_5_112921 0.5kb downstream 0.5kb downstream 2034   true Lsat_1_v8_lg_5: 238166009-238168042 Lactuca sativa
Lsat_1_v5_gn_5_112921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 238166009-238166508 Lactuca sativa
Lsat_1_v5_gn_5_112921 1.0kb upstream 1.0kb upstream 2534   true Lsat_1_v8_lg_5: 238166509-238169042 Lactuca sativa
Lsat_1_v5_gn_5_112921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 238168043-238169042 Lactuca sativa
Lsat_1_v5_gn_5_112921 1.0kb downstream 1.0kb downstream 2534   true Lsat_1_v8_lg_5: 238165509-238168042 Lactuca sativa
Lsat_1_v5_gn_5_112921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 238165509-238166508 Lactuca sativa
Lsat_1_v5_gn_5_112921 2.0kb upstream 2.0kb upstream 3534   true Lsat_1_v8_lg_5: 238166509-238170042 Lactuca sativa
Lsat_1_v5_gn_5_112921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 238168043-238170042 Lactuca sativa
Lsat_1_v5_gn_5_112921 2.0kb downstream 2.0kb downstream 3534   true Lsat_1_v8_lg_5: 238164509-238168042 Lactuca sativa
Lsat_1_v5_gn_5_112921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 238164509-238166508 Lactuca sativa
Lsat_1_v5_gn_5_112921 5.0kb upstream 5.0kb upstream 6534   true Lsat_1_v8_lg_5: 238166509-238173042 Lactuca sativa
Lsat_1_v5_gn_5_112921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 238168043-238173042 Lactuca sativa
Lsat_1_v5_gn_5_112921 5.0kb downstream 5.0kb downstream 6534   true Lsat_1_v8_lg_5: 238161509-238168042 Lactuca sativa
Lsat_1_v5_gn_5_112921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 238161509-238166508 Lactuca sativa
Lsat_1_v5_gn_5_112921 10.0kb upstream 10.0kb upstream 11534   true Lsat_1_v8_lg_5: 238166509-238178042 Lactuca sativa
Lsat_1_v5_gn_5_112921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 238168043-238178042 Lactuca sativa
Lsat_1_v5_gn_5_112921 10.0kb downstream 10.0kb downstream 11534   true Lsat_1_v8_lg_5: 238156509-238168042 Lactuca sativa
Lsat_1_v5_gn_5_112921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 238156509-238166508 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476613 5263 Asterids View MSA
123746706 5271 Pentapetalae View MSA
122792651 5272 Eudicot View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain