Gene : Lsat_1_v5_gn_5_114061 L. sativa V8
Defline:  (1 of 5) PTHR27000//PTHR27000:SF43 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MLD14 Genomic Order:  2955
Name:  ? Lsat_1_v5_gn_5_114061 Secondary Identifier:  ? PAC:38969441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_114061 0.5kb upstream 0.5kb upstream 2015   true Lsat_1_v8_lg_5: 232643095-232645109 Lactuca sativa
Lsat_1_v5_gn_5_114061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 232644610-232645109 Lactuca sativa
Lsat_1_v5_gn_5_114061 0.5kb downstream 0.5kb downstream 2015   true Lsat_1_v8_lg_5: 232642595-232644609 Lactuca sativa
Lsat_1_v5_gn_5_114061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 232642595-232643094 Lactuca sativa
Lsat_1_v5_gn_5_114061 1.0kb upstream 1.0kb upstream 2515   true Lsat_1_v8_lg_5: 232643095-232645609 Lactuca sativa
Lsat_1_v5_gn_5_114061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 232644610-232645609 Lactuca sativa
Lsat_1_v5_gn_5_114061 1.0kb downstream 1.0kb downstream 2515   true Lsat_1_v8_lg_5: 232642095-232644609 Lactuca sativa
Lsat_1_v5_gn_5_114061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 232642095-232643094 Lactuca sativa
Lsat_1_v5_gn_5_114061 2.0kb upstream 2.0kb upstream 3515   true Lsat_1_v8_lg_5: 232643095-232646609 Lactuca sativa
Lsat_1_v5_gn_5_114061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 232644610-232646609 Lactuca sativa
Lsat_1_v5_gn_5_114061 2.0kb downstream 2.0kb downstream 3515   true Lsat_1_v8_lg_5: 232641095-232644609 Lactuca sativa
Lsat_1_v5_gn_5_114061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 232641095-232643094 Lactuca sativa
Lsat_1_v5_gn_5_114061 5.0kb upstream 5.0kb upstream 6515   true Lsat_1_v8_lg_5: 232643095-232649609 Lactuca sativa
Lsat_1_v5_gn_5_114061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 232644610-232649609 Lactuca sativa
Lsat_1_v5_gn_5_114061 5.0kb downstream 5.0kb downstream 6515   true Lsat_1_v8_lg_5: 232638095-232644609 Lactuca sativa
Lsat_1_v5_gn_5_114061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 232638095-232643094 Lactuca sativa
Lsat_1_v5_gn_5_114061 10.0kb upstream 10.0kb upstream 11515   true Lsat_1_v8_lg_5: 232643095-232654609 Lactuca sativa
Lsat_1_v5_gn_5_114061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 232644610-232654609 Lactuca sativa
Lsat_1_v5_gn_5_114061 10.0kb downstream 10.0kb downstream 11515   true Lsat_1_v8_lg_5: 232633095-232644609 Lactuca sativa
Lsat_1_v5_gn_5_114061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 232633095-232643094 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478033 5263 Asterids View MSA
123750423 5271 Pentapetalae View MSA
122791273 5272 Eudicot View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain