Gene : Lsat_1_v5_gn_5_115421 L. sativa V8
Defline:  (1 of 1) PTHR33321//PTHR33321:SF2 - FAMILY NOT NAMED // BASIC SECRETORY PROTEIN FAMILY PROTEIN Genomic Order:  2974
Name:  ? Lsat_1_v5_gn_5_115421 Secondary Identifier:  ? PAC:38963797
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_115421 0.5kb upstream 0.5kb upstream 1306   true Lsat_1_v8_lg_5: 233408527-233409832 Lactuca sativa
Lsat_1_v5_gn_5_115421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 233409333-233409832 Lactuca sativa
Lsat_1_v5_gn_5_115421 0.5kb downstream 0.5kb downstream 1306   true Lsat_1_v8_lg_5: 233408027-233409332 Lactuca sativa
Lsat_1_v5_gn_5_115421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 233408027-233408526 Lactuca sativa
Lsat_1_v5_gn_5_115421 1.0kb upstream 1.0kb upstream 1806   true Lsat_1_v8_lg_5: 233408527-233410332 Lactuca sativa
Lsat_1_v5_gn_5_115421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 233409333-233410332 Lactuca sativa
Lsat_1_v5_gn_5_115421 1.0kb downstream 1.0kb downstream 1806   true Lsat_1_v8_lg_5: 233407527-233409332 Lactuca sativa
Lsat_1_v5_gn_5_115421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 233407527-233408526 Lactuca sativa
Lsat_1_v5_gn_5_115421 2.0kb upstream 2.0kb upstream 2806   true Lsat_1_v8_lg_5: 233408527-233411332 Lactuca sativa
Lsat_1_v5_gn_5_115421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 233409333-233411332 Lactuca sativa
Lsat_1_v5_gn_5_115421 2.0kb downstream 2.0kb downstream 2806   true Lsat_1_v8_lg_5: 233406527-233409332 Lactuca sativa
Lsat_1_v5_gn_5_115421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 233406527-233408526 Lactuca sativa
Lsat_1_v5_gn_5_115421 5.0kb upstream 5.0kb upstream 5806   true Lsat_1_v8_lg_5: 233408527-233414332 Lactuca sativa
Lsat_1_v5_gn_5_115421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 233409333-233414332 Lactuca sativa
Lsat_1_v5_gn_5_115421 5.0kb downstream 5.0kb downstream 5806   true Lsat_1_v8_lg_5: 233403527-233409332 Lactuca sativa
Lsat_1_v5_gn_5_115421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 233403527-233408526 Lactuca sativa
Lsat_1_v5_gn_5_115421 10.0kb upstream 10.0kb upstream 10806   true Lsat_1_v8_lg_5: 233408527-233419332 Lactuca sativa
Lsat_1_v5_gn_5_115421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 233409333-233419332 Lactuca sativa
Lsat_1_v5_gn_5_115421 10.0kb downstream 10.0kb downstream 10806   true Lsat_1_v8_lg_5: 233398527-233409332 Lactuca sativa
Lsat_1_v5_gn_5_115421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 233398527-233408526 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121444943 5263 Asterids Singleton cluster - no MSA
123756110 5271 Pentapetalae View MSA
122777290 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain