Gene : Lsat_1_v5_gn_5_116021 L. sativa V8
Defline:  (1 of 5) PTHR27000//PTHR27000:SF43 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MLD14 Genomic Order:  3026
Name:  ? Lsat_1_v5_gn_5_116021 Secondary Identifier:  ? PAC:38971416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_116021 0.5kb upstream 0.5kb upstream 2328   true Lsat_1_v8_lg_5: 236494332-236496659 Lactuca sativa
Lsat_1_v5_gn_5_116021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 236494332-236494831 Lactuca sativa
Lsat_1_v5_gn_5_116021 0.5kb downstream 0.5kb downstream 2328   true Lsat_1_v8_lg_5: 236494832-236497159 Lactuca sativa
Lsat_1_v5_gn_5_116021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 236496660-236497159 Lactuca sativa
Lsat_1_v5_gn_5_116021 1.0kb upstream 1.0kb upstream 2828   true Lsat_1_v8_lg_5: 236493832-236496659 Lactuca sativa
Lsat_1_v5_gn_5_116021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 236493832-236494831 Lactuca sativa
Lsat_1_v5_gn_5_116021 1.0kb downstream 1.0kb downstream 2828   true Lsat_1_v8_lg_5: 236494832-236497659 Lactuca sativa
Lsat_1_v5_gn_5_116021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 236496660-236497659 Lactuca sativa
Lsat_1_v5_gn_5_116021 2.0kb upstream 2.0kb upstream 3828   true Lsat_1_v8_lg_5: 236492832-236496659 Lactuca sativa
Lsat_1_v5_gn_5_116021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 236492832-236494831 Lactuca sativa
Lsat_1_v5_gn_5_116021 2.0kb downstream 2.0kb downstream 3828   true Lsat_1_v8_lg_5: 236494832-236498659 Lactuca sativa
Lsat_1_v5_gn_5_116021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 236496660-236498659 Lactuca sativa
Lsat_1_v5_gn_5_116021 5.0kb upstream 5.0kb upstream 6828   true Lsat_1_v8_lg_5: 236489832-236496659 Lactuca sativa
Lsat_1_v5_gn_5_116021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 236489832-236494831 Lactuca sativa
Lsat_1_v5_gn_5_116021 5.0kb downstream 5.0kb downstream 6828   true Lsat_1_v8_lg_5: 236494832-236501659 Lactuca sativa
Lsat_1_v5_gn_5_116021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 236496660-236501659 Lactuca sativa
Lsat_1_v5_gn_5_116021 10.0kb upstream 10.0kb upstream 11828   true Lsat_1_v8_lg_5: 236484832-236496659 Lactuca sativa
Lsat_1_v5_gn_5_116021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 236484832-236494831 Lactuca sativa
Lsat_1_v5_gn_5_116021 10.0kb downstream 10.0kb downstream 11828   true Lsat_1_v8_lg_5: 236494832-236506659 Lactuca sativa
Lsat_1_v5_gn_5_116021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 236496660-236506659 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478033 5263 Asterids View MSA
123750423 5271 Pentapetalae View MSA
122791273 5272 Eudicot View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain