Gene : Lsat_1_v5_gn_5_115840 L. sativa V8
Defline:  (1 of 3) 2.4.1.128 - Scopoletin glucosyltransferase Genomic Order:  3028
Name:  ? Lsat_1_v5_gn_5_115840 Secondary Identifier:  ? PAC:38969501
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7186 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_115840 0.5kb upstream 0.5kb upstream 1928   true Lsat_1_v8_lg_5: 236794077-236796004 Lactuca sativa
Lsat_1_v5_gn_5_115840 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 236795505-236796004 Lactuca sativa
Lsat_1_v5_gn_5_115840 0.5kb downstream 0.5kb downstream 1928   true Lsat_1_v8_lg_5: 236793577-236795504 Lactuca sativa
Lsat_1_v5_gn_5_115840 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 236793577-236794076 Lactuca sativa
Lsat_1_v5_gn_5_115840 1.0kb upstream 1.0kb upstream 2428   true Lsat_1_v8_lg_5: 236794077-236796504 Lactuca sativa
Lsat_1_v5_gn_5_115840 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 236795505-236796504 Lactuca sativa
Lsat_1_v5_gn_5_115840 1.0kb downstream 1.0kb downstream 2428   true Lsat_1_v8_lg_5: 236793077-236795504 Lactuca sativa
Lsat_1_v5_gn_5_115840 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 236793077-236794076 Lactuca sativa
Lsat_1_v5_gn_5_115840 2.0kb upstream 2.0kb upstream 3428   true Lsat_1_v8_lg_5: 236794077-236797504 Lactuca sativa
Lsat_1_v5_gn_5_115840 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 236795505-236797504 Lactuca sativa
Lsat_1_v5_gn_5_115840 2.0kb downstream 2.0kb downstream 3428   true Lsat_1_v8_lg_5: 236792077-236795504 Lactuca sativa
Lsat_1_v5_gn_5_115840 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 236792077-236794076 Lactuca sativa
Lsat_1_v5_gn_5_115840 5.0kb upstream 5.0kb upstream 6428   true Lsat_1_v8_lg_5: 236794077-236800504 Lactuca sativa
Lsat_1_v5_gn_5_115840 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 236795505-236800504 Lactuca sativa
Lsat_1_v5_gn_5_115840 5.0kb downstream 5.0kb downstream 6428   true Lsat_1_v8_lg_5: 236789077-236795504 Lactuca sativa
Lsat_1_v5_gn_5_115840 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 236789077-236794076 Lactuca sativa
Lsat_1_v5_gn_5_115840 10.0kb upstream 10.0kb upstream 11428   true Lsat_1_v8_lg_5: 236794077-236805504 Lactuca sativa
Lsat_1_v5_gn_5_115840 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 236795505-236805504 Lactuca sativa
Lsat_1_v5_gn_5_115840 10.0kb downstream 10.0kb downstream 11428   true Lsat_1_v8_lg_5: 236784077-236795504 Lactuca sativa
Lsat_1_v5_gn_5_115840 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 236784077-236794076 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469048 5263 Asterids View MSA
123746934 5271 Pentapetalae View MSA
122787679 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain