Gene : Lsat_1_v5_gn_5_115981 L. sativa V8
Defline:  (1 of 5) PTHR27000//PTHR27000:SF43 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MLD14 Genomic Order:  3027
Name:  ? Lsat_1_v5_gn_5_115981 Secondary Identifier:  ? PAC:38968524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_115981 0.5kb upstream 0.5kb upstream 1740   true Lsat_1_v8_lg_5: 236549949-236551688 Lactuca sativa
Lsat_1_v5_gn_5_115981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 236549949-236550448 Lactuca sativa
Lsat_1_v5_gn_5_115981 0.5kb downstream 0.5kb downstream 1740   true Lsat_1_v8_lg_5: 236550449-236552188 Lactuca sativa
Lsat_1_v5_gn_5_115981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 236551689-236552188 Lactuca sativa
Lsat_1_v5_gn_5_115981 1.0kb upstream 1.0kb upstream 2240   true Lsat_1_v8_lg_5: 236549449-236551688 Lactuca sativa
Lsat_1_v5_gn_5_115981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 236549449-236550448 Lactuca sativa
Lsat_1_v5_gn_5_115981 1.0kb downstream 1.0kb downstream 2240   true Lsat_1_v8_lg_5: 236550449-236552688 Lactuca sativa
Lsat_1_v5_gn_5_115981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 236551689-236552688 Lactuca sativa
Lsat_1_v5_gn_5_115981 2.0kb upstream 2.0kb upstream 3240   true Lsat_1_v8_lg_5: 236548449-236551688 Lactuca sativa
Lsat_1_v5_gn_5_115981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 236548449-236550448 Lactuca sativa
Lsat_1_v5_gn_5_115981 2.0kb downstream 2.0kb downstream 3240   true Lsat_1_v8_lg_5: 236550449-236553688 Lactuca sativa
Lsat_1_v5_gn_5_115981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 236551689-236553688 Lactuca sativa
Lsat_1_v5_gn_5_115981 5.0kb upstream 5.0kb upstream 6240   true Lsat_1_v8_lg_5: 236545449-236551688 Lactuca sativa
Lsat_1_v5_gn_5_115981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 236545449-236550448 Lactuca sativa
Lsat_1_v5_gn_5_115981 5.0kb downstream 5.0kb downstream 6240   true Lsat_1_v8_lg_5: 236550449-236556688 Lactuca sativa
Lsat_1_v5_gn_5_115981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 236551689-236556688 Lactuca sativa
Lsat_1_v5_gn_5_115981 10.0kb upstream 10.0kb upstream 11240   true Lsat_1_v8_lg_5: 236540449-236551688 Lactuca sativa
Lsat_1_v5_gn_5_115981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 236540449-236550448 Lactuca sativa
Lsat_1_v5_gn_5_115981 10.0kb downstream 10.0kb downstream 11240   true Lsat_1_v8_lg_5: 236550449-236561688 Lactuca sativa
Lsat_1_v5_gn_5_115981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 236551689-236561688 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464536 5263 Asterids View MSA
123749791 5271 Pentapetalae View MSA
122773315 5272 Eudicot View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain